Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0819 ATGGGAAACTTTCAACAAGAAGAAGCTAGCACTCTGGTACAAGACATCTGTGCGTTATACGAGCAAATCTCAAGCCTAGACAGCCTCAAACCCTCAAAAAATGTTGACACCCTCTTCACCAAACTTGTGAGCACATGCATCCCACCCGCACCTCATCTCAACATCACAAACTTACCCAAAGATGTGCAAGAAATAAGGTCTAAACTCATTATACTGTGTGGAGAGGCAGAGGGGTTTCTAGAATCTCACTTCTCAACAATCTTAGCCTCCTATAAAAACCCAATTGAAAACCTCAGCCTTTTCCCTTACTACAACAATTACCTCAAACTTAGCCTCCTTGAGTTCAATATTCTGACCAAATATTGCACTCAAACCCCTAACAAGATTGCCTTTGTGGGTTCTGGCCCTCTCCCTCTTACGTCAATTGTCCTAGCCCTAAACCATCTTCCCACAACATCTTTTCACAATTATGACATTGACCCACTTGCCAATTCTAGGGCTATTAGCCTAATACCACCTCATCATGATCTGTCGAACCGTATGTTTTTTCATACTAGTGATGTTTTGGATGTGATTGAGGGTTTGAAGGAATACGATGTTGTTTTTTTGGCTGCTCTTGTGGGACTGAATAAGGAAGAGAAAGTTAGAGTCATAGAGCATTTGGCCAAGTATATGGCTCCTGGAGCTTATTTGATGCTGAGGAGCGCTCATGGTGCTAGGGCTTTTCTTTACCCGGTGGTTGATGCTAGTGATCTTAACTTAGGTTTTGAGGTTCTTACTGTTTTTCATCCTACGGATGAAGTTATAAATTCTGTTGTTCTTGCCCGTAAAGCTCCGGTAATGGCACAGCTGCCTATTGAGTTGAAGATCGCTGATCGTCATCATGAGACGGGGCATAACATGAACTCACTCTGCATATTCCCTTACAAGTGTTCTCATGATCATCACTTGAATATGATTGAGGAATTTGCCATGGAGGAGCAACTTTCGTAA 993 42.4 MGNFQQEEASTLVQDICALYEQISSLDSLKPSKNVDTLFTKLVSTCIPPAPHLNITNLPKDVQEIRSKLIILCGEAEGFLESHFSTILASYKNPIENLSLFPYYNNYLKLSLLEFNILTKYCTQTPNKIAFVGSGPLPLTSIVLALNHLPTTSFHNYDIDPLANSRAISLIPPHHDLSNRMFFHTSDVLDVIEGLKEYDVVFLAALVGLNKEEKVRVIEHLAKYMAPGAYLMLRSAHGARAFLYPVVDASDLNLGFEVLTVFHPTDEVINSVVLARKAPVMAQLPIELKIADRHHETGHNMNSLCIFPYKCSHDHHLNMIEEFAMEEQLS 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4161491 4162483 + Conep10aG0084300.1 Cone10ag0819 446617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0819 330 Gene3D Vaccinia Virus protein VP39 9 279 IPR029063 -
Cone10ag0819 330 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 4 282 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone10ag0819 330 PANTHER NICOTIANAMINE SYNTHASE 3 1 289 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone10ag0819 330 Pfam Nicotianamine synthase protein 7 280 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone10ag0819 330 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 261 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0819 Cone-Chr10:4161491 Cone5ag0076 Cone-Chr5:365771 1.07E-141 dispersed
Cone1ag1552 Cone-Chr1:57389062 Cone10ag0819 Cone-Chr10:4161491 4.64E-82 wgd
Cone10ag0819 Cone-Chr10:4161491 Cone3ag0845 Cone-Chr3:4328238 6.90E-216 wgd
Cone10ag0819 Cone-Chr10:4161491 Cone5ag0075 Cone-Chr5:361880 8.63E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0819 K05953 - cit:102621359 402.905