Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0838 | ATGGCAAGTGGTCTTAATGCAGGATTGTCCAAGAAAACTGGTGTTTTTGGTCTTATGGTCTGGGAAGTAATAGGGATTGCAGTTGGGTTGTTTATCTTGGTTATCCTCTCCGTACTTCCCTTGTGTCTTACTTCACGAAAGAAGCTTAGAAGAAGACGCAGAGATGAGTTTCTCCCAAGCCAAATCCCAATCTTATCAAAGGAGATCAAGGAAGTTCAAACAGATGAATCCATTCCTCGTGAAAGAATACCTCCGACCATTCACAATCATGATAAATCGAGCAACAAAGATTCCAATAAGGTTCTGGTCCATCTGGGTATGGGAAAGAGAACGAGTGAAGAGTCAGGTTGGTTTCATCATTTAGAGAAAGATGGTTTTGTTGGGTCTCAATCCGGTGAAAAAGAGAGTTCCAGCTCTGCTACTGAGTATGAACCTTCTTCCTTTCCGATCACAGTACAATCTCCACTATGTGGCCTTTCGGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACTTTACGGGATCTTGAGACTGCAACAAACTGTTTTTCGAGAGAGAATGTCCTAGGTGAAGGCGGTTATGGAGTTGTATACCAGGGACACTTAGCTAATGGGACTCCTGTAGCAGTTAAAAAGATTCTCAATAACCTAGGCCAAGCAGAGAAAGAGTTTCGAGCGGAAGTTGAGGCGATTGGCCACGTGCGTCATAAGAATTTGGTTCGTCTTTTGGGATATTGCATTGAAGGTACTCACAGGATGCTGGTGTATGAGTACGTGAACAATGGAAACCTAGAGCAGTGGCTTCATGGAGGTATGGGGGAATACGGGTATCTAACATGGGAGGCCCGCATGAAGATTATCCTTGGCACAGCTAAAGCGCTCGCATACTTGCATGAGGCCATTGAACCAAAGGTAGTGCACCGTGACATCAAGTCAAGCAATATACTGATCGATGACACGTTCAATGCCAAGGTGTCCGACTTTGGTCTAGCAAAGATGCTGGGTGCTGGCAAGAATCATATAATGACCCGGGTTATGGGGACCTTTGGATATGTGGCTCCCGAATATGCAAATAGTGGTCTTTTAAATGAAAAGATCGATGTCTATAGCTTTGGTGTTCTTCTTTTAGAGGCAGTTACTGGAAGAGATCCTGTGGACTATGGCCGGCCAGCTCGGGAGGTTAATCTCATTGACTGGCTGAAAACGATGGTTGGAAGCAGGCAATCAGAACAAGTGGTAGACCCAAACATAGAGGCAAGGCCATCAACAAGAGCCTTAAAACGAGCTCTCTTGACTGCTTTAAGGTGTGTTGATCCAGATAATGAAAAGAGGCCAACAATGGGCCAAGTTGTTCGAATGCTCGAGTCCGAAGAATATCCCATACCTCGAGAGGATCGAAGGCACCGAAGAAGTCAGGCAGATAACACGGAGATTGAGTCCTTAAGGGAATGTTCTGATGCTGTTCCGAATGAAAATCCAGCTTCAAGTAGACACAACCAACAAACATAA | 1509 | 44.93 | MASGLNAGLSKKTGVFGLMVWEVIGIAVGLFILVILSVLPLCLTSRKKLRRRRRDEFLPSQIPILSKEIKEVQTDESIPRERIPPTIHNHDKSSNKDSNKVLVHLGMGKRTSEESGWFHHLEKDGFVGSQSGEKESSSSATEYEPSSFPITVQSPLCGLSEFSHLGWGHWFTLRDLETATNCFSRENVLGEGGYGVVYQGHLANGTPVAVKKILNNLGQAEKEFRAEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGGMGEYGYLTWEARMKIILGTAKALAYLHEAIEPKVVHRDIKSSNILIDDTFNAKVSDFGLAKMLGAGKNHIMTRVMGTFGYVAPEYANSGLLNEKIDVYSFGVLLLEAVTGRDPVDYGRPAREVNLIDWLKTMVGSRQSEQVVDPNIEARPSTRALKRALLTALRCVDPDNEKRPTMGQVVRMLESEEYPIPREDRRHRRSQADNTEIESLRECSDAVPNENPASSRHNQQT | 502 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4250465 | 4253833 | - | Conep10aG0086300.1 | Cone10ag0838 | 446636 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0838 | 502 | PANTHER | OS01G0323000 PROTEIN | 1 | 479 | IPR052232 | - | |
Cone10ag0838 | 502 | MobiDBLite | consensus disorder prediction | 458 | 502 | - | - | |
Cone10ag0838 | 502 | SUPERFAMILY | Protein kinase-like (PK-like) | 167 | 464 | IPR011009 | - | |
Cone10ag0838 | 502 | SMART | serkin_6 | 183 | 454 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone10ag0838 | 502 | ProSitePatterns | Protein kinases ATP-binding region signature. | 189 | 212 | IPR017441 | GO:0005524(InterPro) | |
Cone10ag0838 | 502 | Gene3D | Phosphorylase Kinase; domain 1 | 162 | 258 | - | - | |
Cone10ag0838 | 502 | MobiDBLite | consensus disorder prediction | 130 | 146 | - | - | |
Cone10ag0838 | 502 | Pfam | Protein kinase domain | 184 | 452 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone10ag0838 | 502 | ProSiteProfiles | Protein kinase domain profile. | 183 | 460 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone10ag0838 | 502 | MobiDBLite | consensus disorder prediction | 458 | 481 | - | - | |
Cone10ag0838 | 502 | CDD | STKc_IRAK | 189 | 455 | - | - | |
Cone10ag0838 | 502 | MobiDBLite | consensus disorder prediction | 126 | 146 | - | - | |
Cone10ag0838 | 502 | Gene3D | Transferase(Phosphotransferase) domain 1 | 259 | 471 | - | - | |
Cone10ag0838 | 502 | FunFam | Putative receptor-like protein kinase | 165 | 258 | - | - | |
Cone10ag0838 | 502 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 305 | 317 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag0838 | 502 | FunFam | Putative receptor-like serine/threonine-protein kinase | 259 | 470 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0838 | Cone-Chr10:4250465 | Cone3ag1487 | Cone-Chr3:33526021 | 2.03E-207 | dispersed | |
Cone1ag1578 | Cone-Chr1:57478311 | Cone10ag0838 | Cone-Chr10:4250465 | 4.21E-257 | wgd | |
Cone10ag0838 | Cone-Chr10:4250465 | Cone14ag0675 | Cone-Chr14:3469790 | 1.87E-48 | wgd | |
Cone10ag0838 | Cone-Chr10:4250465 | Cone20ag1003 | Cone-Chr20:7052299 | 1.44E-85 | wgd | |
Cone10ag0838 | Cone-Chr10:4250465 | Cone5ag0098 | Cone-Chr5:454772 | 2.95E-257 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81831 | PF02373 | JmjC | 1.20E-44 | CL0029 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0838 | - | - | - | 0.0 |