Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0840 ATGAGTAAGGGTTCGGGAACTAGTGGAGCGGAGGCGCAGTATGTGGCGGCGAAAACCTCCGTTTGGTGGGACATAGAGAACTGTCACGTGCCGAGGGGGTGCGACCCACATGCAATTGCTCAGAACATCAGCTCCGCCCTCGTTCATCTAAATTACTCCGGTCCGGTCTCCATATCTGCTTACGGCGACACCACTCGCCTCCCTTCTTCTCTTCAGCACTCTCTTTCCTCCACCGGCATCGCCCTCAACCATGTCCCTGCTGGTGTTAAAGATGCTAGTGACAAGAAGATTCTTGTGGACATGCTGTTTTGGGCTGTGGACAATCCTGCACCCGCAAACTATCTGTTAATTTCTGGGGATCGAGATTTCTCTAATGCTCTCCATCAGCTACGAATGAGGAGATACAATATCCTCATAGCACAACCTCAGCAAGCATCTGCGCCCCTAATTGCAGCCGCTAAGAGCGTATGGCTTTGGACCAGCCTTGTGTCTGGAGGCCCTCCACTCACAAACACTGACTCACTTCAAAATAACAATATCTATGTCTCAAATTCCAATACATCTCAGATTCCAGTTTCTAGTACTCTTCCAATGCAGCAATCATTGGATTCCCATCTTATGAACCCTCAATTAGTGAATCAGAAATTTTCCAGTATGGGAAGAGGTGCTGATCCTAAAAATAAAGGGAAACTAGCTAGGAAAACCAGCCAACTGAATGGATCAAAAACTTTCAGTATGCGTGATGGGATTCACGAGGATAATGGCAATGTAAGTTCTTACCAATCTAGTACTTATCCAAATATCCCTCATAACCCTAATTTTCCTCCGGGTAATTCTGATCCTTCATGGAGCAACAACAATGGCCAGAACACCTACCTGAATCATTACTCTCCACCTATAAGAGGAAACAGCTATGATACTCAACCTGCATTTGTACCCAACAGCATGCACCCACCTAACCCCCGGCCTTATATACCTCCTCCAATGCTTCCTAGGCCTGCCAGACCCAGCTTTACCTCAGGCCCTCCGCCGACATATATGCCTGATAGTAGTAAATTGAGTGTTTCAGCACACCCCAGCAGTGTCCACAATAGTTCTAGTGCTCAACCATGGAATGGAGAGACACGTGATTCTATTACCAAGGCTCCAAATTCTGGGGGCTTTATTCAACCGAATAGAGGAAATATGGGACAAAAAAACACACCTTATTCTGATAACAGACAGAACAACAGGTATCCACATGGTGCAGAATATCGATCCGGATCTTCAGGAGGAATCAGTTCCACTAGTATGTCCAGTAGTGGTGGATGGGGAACTCTGGGCTGTCCAAAACCTTCTGAACAGGTACAAGGCCTTATAGGGCTTGTCTTGCTTGCCTTAAACACACTGAAAAGTGAAAAGATAATGCCAACTGAATCAAATATAGCTGACTGCATTCGATTTGGAGATGCCAAACATCGCAGTACAGATGTAAGGAAAGCCCTTGAGAGTGCCATCGAGCAGCAAATGGTAGTAAAACAGAATATAGGTGCTGTGCAGCTGTATATTGGTAAGAATGAGAAACTATGGAGATGTGTGAAGCCTCTATGTGGTAATCCTAAGCAGTATTCAAAAGAAACGTGGAATGAAATCCAAATTTTTTTAACATCCTCTAATGGACGTTCTGCAATAATAGCCTCTCAGTGCAGGTATGAAGCAGGTACTGTTTTGAAGAGTTTGTGTTTGAAAGAGTTCTCTTTGGGGGATGTACTTCAGATTCTGAATATGGTGGTTACTGTTAAAAAATGGATCATCTGTCATCAATCAGGATGGCAACCCATAAAAATTATACTAACTGAAAACAAGACTGAGTCAGGGGATGTAGCTGGTGCAAGTTCAATATCCGAATGGTAG 1893 44.69 MSKGSGTSGAEAQYVAAKTSVWWDIENCHVPRGCDPHAIAQNISSALVHLNYSGPVSISAYGDTTRLPSSLQHSLSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILIAQPQQASAPLIAAAKSVWLWTSLVSGGPPLTNTDSLQNNNIYVSNSNTSQIPVSSTLPMQQSLDSHLMNPQLVNQKFSSMGRGADPKNKGKLARKTSQLNGSKTFSMRDGIHEDNGNVSSYQSSTYPNIPHNPNFPPGNSDPSWSNNNGQNTYLNHYSPPIRGNSYDTQPAFVPNSMHPPNPRPYIPPPMLPRPARPSFTSGPPPTYMPDSSKLSVSAHPSSVHNSSSAQPWNGETRDSITKAPNSGGFIQPNRGNMGQKNTPYSDNRQNNRYPHGAEYRSGSSGGISSTSMSSSGGWGTLGCPKPSEQVQGLIGLVLLALNTLKSEKIMPTESNIADCIRFGDAKHRSTDVRKALESAIEQQMVVKQNIGAVQLYIGKNEKLWRCVKPLCGNPKQYSKETWNEIQIFLTSSNGRSAIIASQCRYEAGTVLKSLCLKEFSLGDVLQILNMVVTVKKWIICHQSGWQPIKIILTENKTESGDVAGASSISEW 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4279690 4283632 + Conep10aG0086500.1 Cone10ag0840 446638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0840 630 MobiDBLite consensus disorder prediction 252 268 - -
Cone10ag0840 630 Pfam NYN domain 18 154 IPR021139 GO:0004540(InterPro)
Cone10ag0840 630 CDD PIN_limkain_b1_N_like 18 142 - -
Cone10ag0840 630 MobiDBLite consensus disorder prediction 313 441 - -
Cone10ag0840 630 MobiDBLite consensus disorder prediction 314 343 - -
Cone10ag0840 630 PANTHER LIMKAIN B LKAP 7 587 IPR024768 GO:0005777(InterPro)|GO:0010468(InterPro)
Cone10ag0840 630 Pfam OST-HTH Associated domain 558 616 IPR025677 -
Cone10ag0840 630 MobiDBLite consensus disorder prediction 277 292 - -
Cone10ag0840 630 MobiDBLite consensus disorder prediction 344 439 - -
Cone10ag0840 630 Gene3D - 13 161 - -
Cone10ag0840 630 MobiDBLite consensus disorder prediction 219 292 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0840 Cone-Chr10:4279690 Cone3ag0869 Cone-Chr3:4433717 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0840 - - - 0.0