Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0843 ATGGATTATAGGGGGTACAATGGCAGACTGGCAAACAGTCAAGATAGACGTCAGAATGAAAGGGAGCAGGTATATCAGGAGTCTCTTATTGAGGACTTGGCCGAGGATTTTCGCCTGCCAATCAATCACAAGCCAACAGAAAATGTTGATCTTGAAAATGTAGAGCAAGCCTCATTAGACACACAATTGACTTCCTCTAACATCGGGTTTAGGCTTCTCCAGAAAATGGGCTGGAAAGGGAAGGGTCTAGGAAAAGATGAGCAAGGAATAACTGAGCCCATTAAATCTGGGATTAGAGATCCAAAATTAGGGGTTGGGAAACAAGAAGAAGATGACTTTTTCACTGCAGAAGAAAATATTCAGCGCCGAAAACTTGATGTTGAGCTAGAGGAAACTGAGGAACATGCAAAGAAGCGGGAGGTCTTAGCAGAACGTGAGCAAAAAATTCAGTCAGAGGTCAAGGAGATACAGAAGGTGTTCTATTGTGATCTTTGCAACAAACAATACAAGTTGGCTGTGGAGTTTGAAGCTCATCTTAGCTCATATGATCACAACCATAGAAAGCGTTTTAAAGAAATGAAAGAAATGCACGGTACAAGCAGTCGGGATGATCGACAAAAACGTGAACAACAACGTCAAGAGAGAGAGATGGCAAAATTTGCTCAACTTGTAGATGCGCGTAAGCAGCAGCAACAACTACGGCTACAAGAAGAGTTAGGCTCTGCTCCTGTTTCCACTGAACCGGGAAGTGCTACTGCAGTTGTAGATCAGGAACAACGCAAAGCATTGAAGTTTGGGTTCTCTTCTAAAGGCAGCACATCCAAGACCTCATTTGGCAGTGCAGCCAAAAAACCAAAAGTAGCTGTCGCTTCGGTTTTTGGTAATGACAGCGACAAAGAATAG 903 43.3 MDYRGYNGRLANSQDRRQNEREQVYQESLIEDLAEDFRLPINHKPTENVDLENVEQASLDTQLTSSNIGFRLLQKMGWKGKGLGKDEQGITEPIKSGIRDPKLGVGKQEEDDFFTAEENIQRRKLDVELEETEEHAKKREVLAEREQKIQSEVKEIQKVFYCDLCNKQYKLAVEFEAHLSSYDHNHRKRFKEMKEMHGTSSRDDRQKREQQRQEREMAKFAQLVDARKQQQQLRLQEELGSAPVSTEPGSATAVVDQEQRKALKFGFSSKGSTSKTSFGSAAKKPKVAVASVFGNDSDKE 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4291270 4294292 - Conep10aG0086800.1 Cone10ag0843 446641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0843 300 Pfam G-patch domain 66 106 IPR000467 GO:0003676(InterPro)
Cone10ag0843 300 MobiDBLite consensus disorder prediction 194 215 - -
Cone10ag0843 300 ProSiteProfiles G-patch domain profile. 65 110 IPR000467 GO:0003676(InterPro)
Cone10ag0843 300 ProSitePatterns Zinc finger C2H2 type domain signature. 162 184 IPR013087 -
Cone10ag0843 300 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 300 - -
Cone10ag0843 300 MobiDBLite consensus disorder prediction 266 280 - -
Cone10ag0843 300 MobiDBLite consensus disorder prediction 232 252 - -
Cone10ag0843 300 MobiDBLite consensus disorder prediction 1 23 - -
Cone10ag0843 300 SUPERFAMILY beta-beta-alpha zinc fingers 142 195 IPR036236 -
Cone10ag0843 300 SMART G-patch_5 63 108 IPR000467 GO:0003676(InterPro)
Cone10ag0843 300 MobiDBLite consensus disorder prediction 265 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0843 Cone-Chr10:4291270 Cone1ag0934 Cone-Chr1:54700331 5.34E-07 dispersed
Cone1ag1742 Cone-Chr1:58160481 Cone10ag0843 Cone-Chr10:4291270 1.36E-08 transposed
Cone10ag0843 Cone-Chr10:4291270 Cone3ag0872 Cone-Chr3:4448625 7.58E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0843 - - - 0.0