Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0844 ATGACAATGAAGCTGCCATGGTTATCATGTTTTTGGTTTTTTGTAGGTCTTGTTCTTATCAAATGGGTGGGTGTTAATTCTATTACGGAACAATCTTCCGTTGAACCTTTCCATATTTCGGAACCTACTTCCAATTCTCTCTCGGTCGGACTTACACTTATCAACGGAGCCGATGCGAAAGGAGCAGTTTGCTTAGACGGAACATTACCTGGATATCATTTGCATCGTGGATACGGTTCCGGATCAAATAGTTGGCTCGTCCAATTGGAGGGGGGTGGATGGTGCGATAATGTTAGAAATTGCGTTTATCGGAAGAATTCTAGGCGGGGATCATCGATACATATGGAGCAAAATCTTGCTTTTATAGGAATACTTAGCAATAATGTCGAAGATAATCCCGACTTTTACAATTGGAATCGAGTCAAGCTTCGTTATTGCGATGGTGCATCTTTTACAGGAGACGGTGAGTTTCAGGCTGCAAAGTTACAATTTAGAGGGAAGCGAATATGGTCCGTTGCAATGGAAGACTTGATGTCAAAAGGAATGCGTTCGGCAAATCAGGCTCTTCTATCCGGATGCTCTGCTGGAGGTCTGGCAACTATATTGCACTGCGATGAATTCCGGGGAATGTTTCCGACATCTACAAGAGTGAAGTGCCTAAGCGACGGAGGACTATTTCTCGACTCGCGTGATATATCCGGAAGACGACCCCTAAGGGACTTGTTCAGGGGTGTAGTCAGCTTGCAGTGGGTGCACAAGAGTCTGCCCGAACACTGTACTAATAAGTACCGCAACCCGACTTCAAATGTGATTTCCGGGATCAAAACTCCGCTATTTCTTATCAATCCAGCCTATGATACATGGCAGATCCAATTCAGTTTAGCTCCACCATCCTCGGATCCGCGCGGCCATTGGCAAGATTGCCGGTTAAACCACTTGGAATGTTCTCCAAATCAGATCGAAATTCTGCAAGGATTCCGGAATCAGTTGCTGAATGTGGTCAATGACTTCTCTAGATTGAATGGAAGTGGGTTCTTTATAAACTCATGTTTTTCTCACTGCCAGAGTGAGAGGCAGGACACATGGTTTTCCGATGATTCTCCTCGGATCGGAAACAAGACCATCGCAGTAGCGGTCGGTGATTGGTACTTTGATCGAGCAAATGTGAAGGCCATTGATTGTCCTTACCCTTGTGACAACACTTGCCATCATCTCGTTTTCAAAAAGAATCACTAG 1236 44.9 MTMKLPWLSCFWFFVGLVLIKWVGVNSITEQSSVEPFHISEPTSNSLSVGLTLINGADAKGAVCLDGTLPGYHLHRGYGSGSNSWLVQLEGGGWCDNVRNCVYRKNSRRGSSIHMEQNLAFIGILSNNVEDNPDFYNWNRVKLRYCDGASFTGDGEFQAAKLQFRGKRIWSVAMEDLMSKGMRSANQALLSGCSAGGLATILHCDEFRGMFPTSTRVKCLSDGGLFLDSRDISGRRPLRDLFRGVVSLQWVHKSLPEHCTNKYRNPTSNVISGIKTPLFLINPAYDTWQIQFSLAPPSSDPRGHWQDCRLNHLECSPNQIEILQGFRNQLLNVVNDFSRLNGSGFFINSCFSHCQSERQDTWFSDDSPRIGNKTIAVAVGDWYFDRANVKAIDCPYPCDNTCHHLVFKKNH 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4294637 4296839 - Conep10aG0086900.1 Cone10ag0844 446642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0844 411 Pfam Pectinacetylesterase 44 388 IPR004963 GO:0016787(InterPro)
Cone10ag0844 411 PANTHER NOTUM-RELATED 37 404 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0844 Cone-Chr10:4294637 Cone19ag0602 Cone-Chr19:5311186 4.72E-192 dispersed
Cone1ag1586 Cone-Chr1:57518332 Cone10ag0844 Cone-Chr10:4294637 3.98E-211 wgd
Cone10ag0844 Cone-Chr10:4294637 Cone5ag0108 Cone-Chr5:497092 1.70E-212 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0844 K19882 - vvi:100264849 579.711