Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0849 ATGGACGGCGGCGGCGGCGGCGACGAGAAGGAAGCAGTATGCGTGACCGGAGCCAACGGCTTTATCGGCTCATGGCTAGTTCATACACTCATCGAAAACGGCTACACCGATATTCACGCTACCATCTTCCCCGGATCGGACGCTTCTCACCTCCGATCCCTCCCCGGCCACGACGGAGGCGTCCGCCTCAGAATCTTTGAAGCCGACATCTTAGACATGGAGGCTGTATCCAAGGCGGTGGACGGCTGCAAGGGGATCTTTCACGTGGCATCACCGTGCTCGCTCGACGAACCAAAGGACCCACAAGCCGAGCTGGTGAACCCCGCCGTGCAAGGCACAGTCAACATCCTCCACGCCGGCAAGAAATTCAATGTCAGGCGGGTGGTTATCACCTCCTCCATCTCCGCCATGGTCCCGAACCCTAACTGGCCCCTTCACAAGCCGTACGACGGGTCGTCCTGGACCGATCTCGATTACTGCATGTCGCTAGGGAAATGGTACCCTGTTTCCAAGACCTTAGCAGAGAAAGCAGCGTGGGAGCTATCGGAAAAGATCGGGATCGACGTCGTTTCGATTCTTCCGGCCACTTGTCTCGGCCCTCTTCTTCAGCCCGGTCTGAACGCGAGCTGCGGCGTATTGAAACAGCTGCTGGAAGGATCAGAGGACGGTCAGGAGCATCACTGGTTAGGTGCTGTTCATGTGAAAGATGTTGCCAAAGCTCAAGTCTTGCTGTTCGAGAATCCGGAAGCTTCAGGAAGGTTCCTCTGCATGAACGGAATCTGCCAGTTCTCGGAGTTTGCTCGCACTGTTGCCGATCTCTTCCCTGAATTCCCGGTTCACAGATTTACAGGTGAAACACAACCAGGCCTGACTTCATGTAAGGATGCAGCTAAGAAGTTGATTGATCTGGGATTTGTGTTCACGCCTGTTGAAGATGCTGTTCGAGATGCTGTCGCGAGCCTGAGAATGAAAGGTTTTCTGCAGTAG 987 55.12 MDGGGGGDEKEAVCVTGANGFIGSWLVHTLIENGYTDIHATIFPGSDASHLRSLPGHDGGVRLRIFEADILDMEAVSKAVDGCKGIFHVASPCSLDEPKDPQAELVNPAVQGTVNILHAGKKFNVRRVVITSSISAMVPNPNWPLHKPYDGSSWTDLDYCMSLGKWYPVSKTLAEKAAWELSEKIGIDVVSILPATCLGPLLQPGLNASCGVLKQLLEGSEDGQEHHWLGAVHVKDVAKAQVLLFENPEASGRFLCMNGICQFSEFARTVADLFPEFPVHRFTGETQPGLTSCKDAAKKLIDLGFVFTPVEDAVRDAVASLRMKGFLQ 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4334353 4335424 - Conep10aG0087400.1 Cone10ag0849 446647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0849 328 CDD FR_SDR_e 13 305 - -
Cone10ag0849 328 Gene3D - 7 328 - -
Cone10ag0849 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 321 IPR036291 -
Cone10ag0849 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 318 IPR050425 GO:0016616(PANTHER)
Cone10ag0849 328 Pfam NAD dependent epimerase/dehydratase family 13 251 IPR001509 -
Cone10ag0849 328 FunFam Cinnamoyl-CoA reductase 1 7 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0849 Cone-Chr10:4334353 Cone2ag0746 Cone-Chr2:33247355 4.12E-106 dispersed
Cone10ag0849 Cone-Chr10:4334353 Cone7ag0061 Cone-Chr7:266764 7.26E-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0849 - - - 0.0