Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0874 ATGACCCGACCCGGAAGCATCATTCCCGCATCCTTACAAAACCCTAGTTTGGTTTGCAAGTATATCTATCTTCACTGTGGCAGCACTCGTTCTCTGAACAACGACGCTCGGCTCTCCCAGTCCCAGATCTCAAATCAGAGCGATACGTTTTTCCGCGAAGCCATGGCTCTGGTTTTGCATGTTGGGAAGGGAAATAAAAATGCTTTCAAGACGCTTATCGCGGCAGAGTACAATGGCATCAAAGTTGAACTAGCATCAGATTTTGAGATGGGCGTTTCCAACAAAACTCCTCAATTTCTCAAGATGAACCCAATTGGGAAGGTTCCTGTGCTGGAAACCCCTGATGGTGCCATTTTTGAGAGCAATGCCATAGCCCGTTATGTGACTCGCTTGAAGGCTGATACCACGCTATATGGTTCTTCTCCTATTGACTATGGCCACGTAGAGCAGTGGATTGATTTTGCATCACTGGAGCTTGATAGTCATATAGTGGCTTGGATCAGACCTAGGAGGGGATTTTCACCATACATAGCTGCTGTTGAGGAAGCGGCAATTACTGCATTGAAAAGATCATTGGGTGCTTTGAACACACACCTTGCTTCAAACACATTCCTCGTTGGCCATTCAGTAACATTGGCGGACATTGTTTTGACAAGCAACTTGTATCTGGGCTTCACTCATCTTTTCACCAAAAGCTTTACTTCTGAGTTCCCTCATGTTGAGAGATACTTTTGGACTCTGGTCAACCAACCAAACTTCAAAAAGGTTATTGGTGAGGTGAAGCAGACAGACTCTATTCCACCAGTTACATCTGCGAAGAAACCTTCCCAGCCCAAGGAAGCTACCAAGCCAAAGCCCACCGAAACCAAGAAAGAAGAGGTGAAGCCCAAGCCAGAAGCTGCTGCTGTGGAAGAGGAAGAGGCCCCCAAGCCCAAAGCAAAGAACCCCCTTGATCTCCTTCCTCCAAGCAAGATGATTCTTGATGATTGGAAGCGTCTCTACTCTAACACCAAGACCAACTTCCGTGAGGTTGCAATTAAGGGATTCTGGGAAATGTTTGACCCAGAGGGATACTCACTTTGGTTCTGTGACTACAAATACAACGACGAAAATACCGTCTCCTTTGTGACACTAAACAAGGTCGGTGGGTTTCTCCAGCGTATGGATCTGGCCCGCAAATATGCTTTTGGGAAAATGCTCGTGATCGGGTCCGTGCCACCATTCAAGGTGAAGGGTCTATGGCTTTTCCGTGGGCAAGAGATTCCTCCATTTGTTATGGCGGAGTGCTATGACATGGAGCTCTACGAGTGGACCAAGGTCGATCTTTCTGATGAGAACCAAAAGGAGCGGGTCAATCAAATGATTGAAGATCAGGAGCCTTTTGAAGGGGAGGCCCTTTTGGATGCAAAATGCTTCAAGTGA 1422 46.91 MTRPGSIIPASLQNPSLVCKYIYLHCGSTRSLNNDARLSQSQISNQSDTFFREAMALVLHVGKGNKNAFKTLIAAEYNGIKVELASDFEMGVSNKTPQFLKMNPIGKVPVLETPDGAIFESNAIARYVTRLKADTTLYGSSPIDYGHVEQWIDFASLELDSHIVAWIRPRRGFSPYIAAVEEAAITALKRSLGALNTHLASNTFLVGHSVTLADIVLTSNLYLGFTHLFTKSFTSEFPHVERYFWTLVNQPNFKKVIGEVKQTDSIPPVTSAKKPSQPKEATKPKPTETKKEEVKPKPEAAAVEEEEAPKPKAKNPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWEMFDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSVPPFKVKGLWLFRGQEIPPFVMAECYDMELYEWTKVDLSDENQKERVNQMIEDQEPFEGEALLDAKCFK 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4507903 4510887 + Conep10aG0089900.1 Cone10ag0874 446672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0874 473 FunFam Elongation factor 1-gamma 1 313 473 - -
Cone10ag0874 473 SMART EF1G_2 312 420 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Cone10ag0874 473 SUPERFAMILY GST C-terminal domain-like 134 267 IPR036282 -
Cone10ag0874 473 Pfam Glutathione S-transferase, N-terminal domain 64 129 IPR004045 -
Cone10ag0874 473 SUPERFAMILY eEF1-gamma domain 314 473 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Cone10ag0874 473 Gene3D Glutaredoxin 54 128 - -
Cone10ag0874 473 MobiDBLite consensus disorder prediction 278 313 - -
Cone10ag0874 473 SFLD Main (cytGST) 59 244 - -
Cone10ag0874 473 SUPERFAMILY Thioredoxin-like 53 139 IPR036249 -
Cone10ag0874 473 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 313 473 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Cone10ag0874 473 SFLD Glutathione Transferase (cytosolic) 59 244 IPR040079 -
Cone10ag0874 473 Pfam Glutathione S-transferase, C-terminal domain 179 251 IPR004046 -
Cone10ag0874 473 MobiDBLite consensus disorder prediction 264 316 - -
Cone10ag0874 473 Pfam Elongation factor 1 gamma, conserved domain 312 420 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Cone10ag0874 473 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 141 269 IPR010987 -
Cone10ag0874 473 CDD GST_N_EF1Bgamma 57 131 - -
Cone10ag0874 473 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 55 136 IPR004045 -
Cone10ag0874 473 CDD GST_C_EF1Bgamma_like 144 264 - -
Cone10ag0874 473 FunFam Elongation factor 1B gamma 55 128 - -
Cone10ag0874 473 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 55 473 IPR044628 GO:0004364(InterPro)
Cone10ag0874 473 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 313 473 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Cone10ag0874 473 Gene3D - 134 268 - -
Cone10ag0874 473 FunFam Elongation factor 1 gamma 134 270 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0874 Cone-Chr10:4507903 Cone3ag0901 Cone-Chr3:4638505 3.17E-279 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0874 K03233 - vvi:100264325 677.167