Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0874 | ATGACCCGACCCGGAAGCATCATTCCCGCATCCTTACAAAACCCTAGTTTGGTTTGCAAGTATATCTATCTTCACTGTGGCAGCACTCGTTCTCTGAACAACGACGCTCGGCTCTCCCAGTCCCAGATCTCAAATCAGAGCGATACGTTTTTCCGCGAAGCCATGGCTCTGGTTTTGCATGTTGGGAAGGGAAATAAAAATGCTTTCAAGACGCTTATCGCGGCAGAGTACAATGGCATCAAAGTTGAACTAGCATCAGATTTTGAGATGGGCGTTTCCAACAAAACTCCTCAATTTCTCAAGATGAACCCAATTGGGAAGGTTCCTGTGCTGGAAACCCCTGATGGTGCCATTTTTGAGAGCAATGCCATAGCCCGTTATGTGACTCGCTTGAAGGCTGATACCACGCTATATGGTTCTTCTCCTATTGACTATGGCCACGTAGAGCAGTGGATTGATTTTGCATCACTGGAGCTTGATAGTCATATAGTGGCTTGGATCAGACCTAGGAGGGGATTTTCACCATACATAGCTGCTGTTGAGGAAGCGGCAATTACTGCATTGAAAAGATCATTGGGTGCTTTGAACACACACCTTGCTTCAAACACATTCCTCGTTGGCCATTCAGTAACATTGGCGGACATTGTTTTGACAAGCAACTTGTATCTGGGCTTCACTCATCTTTTCACCAAAAGCTTTACTTCTGAGTTCCCTCATGTTGAGAGATACTTTTGGACTCTGGTCAACCAACCAAACTTCAAAAAGGTTATTGGTGAGGTGAAGCAGACAGACTCTATTCCACCAGTTACATCTGCGAAGAAACCTTCCCAGCCCAAGGAAGCTACCAAGCCAAAGCCCACCGAAACCAAGAAAGAAGAGGTGAAGCCCAAGCCAGAAGCTGCTGCTGTGGAAGAGGAAGAGGCCCCCAAGCCCAAAGCAAAGAACCCCCTTGATCTCCTTCCTCCAAGCAAGATGATTCTTGATGATTGGAAGCGTCTCTACTCTAACACCAAGACCAACTTCCGTGAGGTTGCAATTAAGGGATTCTGGGAAATGTTTGACCCAGAGGGATACTCACTTTGGTTCTGTGACTACAAATACAACGACGAAAATACCGTCTCCTTTGTGACACTAAACAAGGTCGGTGGGTTTCTCCAGCGTATGGATCTGGCCCGCAAATATGCTTTTGGGAAAATGCTCGTGATCGGGTCCGTGCCACCATTCAAGGTGAAGGGTCTATGGCTTTTCCGTGGGCAAGAGATTCCTCCATTTGTTATGGCGGAGTGCTATGACATGGAGCTCTACGAGTGGACCAAGGTCGATCTTTCTGATGAGAACCAAAAGGAGCGGGTCAATCAAATGATTGAAGATCAGGAGCCTTTTGAAGGGGAGGCCCTTTTGGATGCAAAATGCTTCAAGTGA | 1422 | 46.91 | MTRPGSIIPASLQNPSLVCKYIYLHCGSTRSLNNDARLSQSQISNQSDTFFREAMALVLHVGKGNKNAFKTLIAAEYNGIKVELASDFEMGVSNKTPQFLKMNPIGKVPVLETPDGAIFESNAIARYVTRLKADTTLYGSSPIDYGHVEQWIDFASLELDSHIVAWIRPRRGFSPYIAAVEEAAITALKRSLGALNTHLASNTFLVGHSVTLADIVLTSNLYLGFTHLFTKSFTSEFPHVERYFWTLVNQPNFKKVIGEVKQTDSIPPVTSAKKPSQPKEATKPKPTETKKEEVKPKPEAAAVEEEEAPKPKAKNPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWEMFDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSVPPFKVKGLWLFRGQEIPPFVMAECYDMELYEWTKVDLSDENQKERVNQMIEDQEPFEGEALLDAKCFK | 473 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4507903 | 4510887 | + | Conep10aG0089900.1 | Cone10ag0874 | 446672 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0874 | 473 | FunFam | Elongation factor 1-gamma 1 | 313 | 473 | - | - | |
Cone10ag0874 | 473 | SMART | EF1G_2 | 312 | 420 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cone10ag0874 | 473 | SUPERFAMILY | GST C-terminal domain-like | 134 | 267 | IPR036282 | - | |
Cone10ag0874 | 473 | Pfam | Glutathione S-transferase, N-terminal domain | 64 | 129 | IPR004045 | - | |
Cone10ag0874 | 473 | SUPERFAMILY | eEF1-gamma domain | 314 | 473 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cone10ag0874 | 473 | Gene3D | Glutaredoxin | 54 | 128 | - | - | |
Cone10ag0874 | 473 | MobiDBLite | consensus disorder prediction | 278 | 313 | - | - | |
Cone10ag0874 | 473 | SFLD | Main (cytGST) | 59 | 244 | - | - | |
Cone10ag0874 | 473 | SUPERFAMILY | Thioredoxin-like | 53 | 139 | IPR036249 | - | |
Cone10ag0874 | 473 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 313 | 473 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cone10ag0874 | 473 | SFLD | Glutathione Transferase (cytosolic) | 59 | 244 | IPR040079 | - | |
Cone10ag0874 | 473 | Pfam | Glutathione S-transferase, C-terminal domain | 179 | 251 | IPR004046 | - | |
Cone10ag0874 | 473 | MobiDBLite | consensus disorder prediction | 264 | 316 | - | - | |
Cone10ag0874 | 473 | Pfam | Elongation factor 1 gamma, conserved domain | 312 | 420 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cone10ag0874 | 473 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 141 | 269 | IPR010987 | - | |
Cone10ag0874 | 473 | CDD | GST_N_EF1Bgamma | 57 | 131 | - | - | |
Cone10ag0874 | 473 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 55 | 136 | IPR004045 | - | |
Cone10ag0874 | 473 | CDD | GST_C_EF1Bgamma_like | 144 | 264 | - | - | |
Cone10ag0874 | 473 | FunFam | Elongation factor 1B gamma | 55 | 128 | - | - | |
Cone10ag0874 | 473 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 55 | 473 | IPR044628 | GO:0004364(InterPro) | |
Cone10ag0874 | 473 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 313 | 473 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cone10ag0874 | 473 | Gene3D | - | 134 | 268 | - | - | |
Cone10ag0874 | 473 | FunFam | Elongation factor 1 gamma | 134 | 270 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0874 | Cone-Chr10:4507903 | Cone3ag0901 | Cone-Chr3:4638505 | 3.17E-279 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0874 | K03233 | - | vvi:100264325 | 677.167 |