Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0885 ATGGAGGTCTTTTCTATTGTCTTGACTCTGCTTTCTGTAATGGCTGCTTTTTCTATTACTGCTTTGTGTTCTTCTTCCACTGACTTCCACGTCTTGCTCGAACTCAAGCGAGGTTTTGAATTCTCCGACCCGGTTCTGAGTACTTGGAACAATTCGAGTGGGAGTTTCGTCTGTTCATCGTGGTTCGGAATTCGATGCGATCAGGGACGAGTTGTATCGTTGGATTTGACGGATTTGAGTCTTTCTGGTTCAGTTTCGCCGTCAATTTCGAGACTTGATTTTCTCGCTCATCTCTCTCTAGCTGGAAACGATTTCAAGGGTTACATTGAGGTCGGAAATTTGAGTAATCTTCGATTTCTGAACATTTCCAACAATCAATTCAATGGAGGTTTGGATTGGAAGTTCGAAGCCCTGCAAAACTTGGAAGTGATCGATGCGTATAACAACAACTTCACTGCTCTGCTTCCAGTTGGGATTTCGAGCTTGAAGAAGAAGCTGAAGCGTTTGGATCTCGGAGGCAACTATTTTCACGGCGAAATTCCGGCGAGTTATGGCGTTTTGGTGAATCTGGAGTATCTTTCTCTTGCCGGGAATGATTTACAAGGAAAAATCCCGTGTGAGTTGGGAAATCTTACGAACTTGAGAGAGATTTATTTGGGGTATTACAATGTTTTTGAAGGTGGGATTCCAAAGGAGTTGGGGAAATTGTTGAACCTGGCTCATATGGATATTTCAAATTGTGAATTGGATGGCCAGATTCCTCATGAATTGGGGAATTTAAGAAGCCTCGACACACTGTATTTGCATACAAATCTTCTCTCTGGAACTATCCCAAAGCATTTAGGCAACCTGACGAACTTAGTTAATCTCGATGTATCCAACAATGCACTCACCGGTGAAATTCCGTTCGAGTTTGTGAATCTCAAGCAACTCAAGCTTTTCAATCTCTTCATGAACAGATTACATGGTTCGATTCCGGATTATGTAGCTGATTTGCCCAGTCTTGAAACTCTGTGCTTGTGGACGAACAATTTCACAGGCATAATCCCGGAAAATCTTGGCCTAAATGGGAAGCTTCAACTTCTTGATTTGTCCTCCAATAAGCTCACTGGAACTATTCCTCCACACATCTGCTCATCAAATCAGCTCGAGATACTGATATTGATGAACAATTTTCTTTTCGGGGCAATTCCTGAGAACTTGGGGACATGTTCTAGTCTTACGAAAGTGAGATTAGGACAGAATTATTTGAACGGAAGCATTCCGAATGGGTTCATTTACTTGCCAGAGCTGAATCTAGTAGAGTTGCAGAACAATTACTTATCTGGAACTCTGCTGGAGAATTCTAATAGCCGATCAAAACCCGTAAAATTAGGGCAGCTTAATCTATCCAATAATCGTTTATTTGGTGCTTTACCGTTTTCACTTTCGAATTTCTCTTCTCTGCAGATTTTTCTCCTTTCTGGGAACCATTTTTCAGGTCCAATTCCACCTTCTATAGGCCAGCTCCATCAAGTTCTAAAGCTTGATGTTAGTCGAAACTCACTTTCTGGTGAAATTCCACCTGAAATCGGCAACTGTTTACTTCTCTCTTACCTTGACATGAGTGACAACAATCTCTCTGGCCCAATCCCACCAGAAATTTCCAATACCCATATCCTGAATTACTTGAATTTATCAAGGAACCACCTCAATCAAACTATACCCAGATCAATTGGAGCCATGAAAAGCCTCACAATAGTTGATTTGTCATTCAATAATCTGTCTGGAAAGTTACCGGAATCAGGGCAATTCACCCTGTTCAATGCTTCATCCTTTGCTGGAAATCCTCAACTTTGTGGTTCCTTACTAAACAATCCTTGCAATTTCACCACAATCACAAACACACCCAGAAAAGGCGCCTCAGATATCAAGCTCATCCTTGCACTTGGCCTACTAATTTGCTCTTTAGTCTTTGCTGTTGCAGCCATAGTCAAAGCCAGATCATTCAAAATCAACAGCTCTGATTCGTGGAAGATGACTGCATTTCAAAAGGTGGATTTTACAGTGGATGATATACTTGAATGTGTGAAAGATGGCAATATTATCGGCAGAGGAGGAGCTGGGACTGTCTTCCATGGAAAAATGCCAAGTGGGGTCGAAATCGCCGTGAAAAAACTGGTTGGTTTTGGGCTAAACAGCCATGACCGTGGTTTCAGAGCCGAAATCCAAACCTTAGGCAGCATTCGCCACAGAAACATAGTGAGACTCTTAGCATTTTGCTCGAACAAATCGACCAATTTGCTTGTTTATGAGTACATGATAAATGGAAGCTTGGGAGAGGCGATTCATGGAAAAAAAGGTGCATTTTTGGGATGGAACTTGAGGTACAAGATAGCAACTGATGCTGCAAAAGGGCTGTGTTATTTGCATCATGATTGTTCCCCATTGATCATCCACAGGGACGTGAAATCCAATAATATTTTGTTGAATTCTAGCTTTGAAGCTCACGTTGCTGATTTTGGACTTGCCAAGTTCTTTTCTGATGGTGGTTGTTCAGAGTGTATGTCTGCTGTTGCTGGGACTTATGGCTACATTGCTCCTGAGTATGCATATACATTACGAGTGGACGAGAAGAGTGACGTGTATAGTTACGGAGTGGTGGTTCTGGAGCTGCTGACAGGGCGGTGGGCCGTAGGGGAGCTCGGGGACGGGGTCGATATAGTTCAATGGTGTAAGAAATCAATACAAGAAGCGGATCATGATGGTGATGATATGATAATGCAGATTGTTGATCAAAGAATAGTATCTAAAGTGCCCAAAGATGAAGCGAAGCACTTGTTCTTCATTGCAATGCTCTGTGTCCAAGAGAACAGTGTCGAGCGGCCCACCATGAGAGATGTTGTTCAAATGCTCTCAGAGTATCCACGTCAGCATCAATCGTCCTCTTCCTCCTCCTCTATCTCTCATGCTTCTAAAAATCATGGGCTCAAACAAAATGTTTGA 2985 42.41 MEVFSIVLTLLSVMAAFSITALCSSSTDFHVLLELKRGFEFSDPVLSTWNNSSGSFVCSSWFGIRCDQGRVVSLDLTDLSLSGSVSPSISRLDFLAHLSLAGNDFKGYIEVGNLSNLRFLNISNNQFNGGLDWKFEALQNLEVIDAYNNNFTALLPVGISSLKKKLKRLDLGGNYFHGEIPASYGVLVNLEYLSLAGNDLQGKIPCELGNLTNLREIYLGYYNVFEGGIPKELGKLLNLAHMDISNCELDGQIPHELGNLRSLDTLYLHTNLLSGTIPKHLGNLTNLVNLDVSNNALTGEIPFEFVNLKQLKLFNLFMNRLHGSIPDYVADLPSLETLCLWTNNFTGIIPENLGLNGKLQLLDLSSNKLTGTIPPHICSSNQLEILILMNNFLFGAIPENLGTCSSLTKVRLGQNYLNGSIPNGFIYLPELNLVELQNNYLSGTLLENSNSRSKPVKLGQLNLSNNRLFGALPFSLSNFSSLQIFLLSGNHFSGPIPPSIGQLHQVLKLDVSRNSLSGEIPPEIGNCLLLSYLDMSDNNLSGPIPPEISNTHILNYLNLSRNHLNQTIPRSIGAMKSLTIVDLSFNNLSGKLPESGQFTLFNASSFAGNPQLCGSLLNNPCNFTTITNTPRKGASDIKLILALGLLICSLVFAVAAIVKARSFKINSSDSWKMTAFQKVDFTVDDILECVKDGNIIGRGGAGTVFHGKMPSGVEIAVKKLVGFGLNSHDRGFRAEIQTLGSIRHRNIVRLLAFCSNKSTNLLVYEYMINGSLGEAIHGKKGAFLGWNLRYKIATDAAKGLCYLHHDCSPLIIHRDVKSNNILLNSSFEAHVADFGLAKFFSDGGCSECMSAVAGTYGYIAPEYAYTLRVDEKSDVYSYGVVVLELLTGRWAVGELGDGVDIVQWCKKSIQEADHDGDDMIMQIVDQRIVSKVPKDEAKHLFFIAMLCVQENSVERPTMRDVVQMLSEYPRQHQSSSSSSSISHASKNHGLKQNV 994
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4565453 4569414 - Conep10aG0091000.1 Cone10ag0885 446683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0885 994 MobiDBLite consensus disorder prediction 968 994 - -
Cone10ag0885 994 Pfam Protein kinase domain 692 963 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0885 994 FunFam Leucine-rich repeat receptor-like kinase 27 134 - -
Cone10ag0885 994 Gene3D Ribonuclease Inhibitor 27 134 IPR032675 -
Cone10ag0885 994 SUPERFAMILY Protein kinase-like (PK-like) 680 965 IPR011009 -
Cone10ag0885 994 SUPERFAMILY L domain-like 357 614 - -
Cone10ag0885 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 767 982 - -
Cone10ag0885 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 224 329 - -
Cone10ag0885 994 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Cone10ag0885 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 135 223 - -
Cone10ag0885 994 PANTHER LEUCINE RICH REPEAT KINASE 2 400 967 IPR051420 -
Cone10ag0885 994 ProSiteProfiles Protein kinase domain profile. 690 942 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0885 994 Pfam Leucine Rich Repeat 508 527 IPR001611 GO:0005515(InterPro)
Cone10ag0885 994 Pfam Leucine Rich Repeat 481 503 IPR001611 GO:0005515(InterPro)
Cone10ag0885 994 Pfam Leucine Rich Repeat 554 574 IPR001611 GO:0005515(InterPro)
Cone10ag0885 994 Pfam Leucine Rich Repeat 577 595 IPR001611 GO:0005515(InterPro)
Cone10ag0885 994 Pfam Leucine Rich Repeat 286 308 IPR001611 GO:0005515(InterPro)
Cone10ag0885 994 Pfam Leucine Rich Repeat 189 211 IPR001611 GO:0005515(InterPro)
Cone10ag0885 994 Pfam Leucine Rich Repeat 358 379 IPR001611 GO:0005515(InterPro)
Cone10ag0885 994 Pfam Leucine Rich Repeat 530 550 IPR001611 GO:0005515(InterPro)
Cone10ag0885 994 Pfam Leucine Rich Repeat 116 134 IPR001611 GO:0005515(InterPro)
Cone10ag0885 994 Pfam Leucine Rich Repeat 238 260 IPR001611 GO:0005515(InterPro)
Cone10ag0885 994 SUPERFAMILY RNI-like 73 417 - -
Cone10ag0885 994 SMART LRR_typ_2 187 211 IPR003591 -
Cone10ag0885 994 SMART LRR_typ_2 575 598 IPR003591 -
Cone10ag0885 994 SMART LRR_typ_2 138 161 IPR003591 -
Cone10ag0885 994 SMART LRR_typ_2 260 284 IPR003591 -
Cone10ag0885 994 SMART LRR_typ_2 332 356 IPR003591 -
Cone10ag0885 994 SMART LRR_typ_2 503 527 IPR003591 -
Cone10ag0885 994 SMART LRR_typ_2 357 380 IPR003591 -
Cone10ag0885 994 Gene3D Ribonuclease Inhibitor 224 328 IPR032675 -
Cone10ag0885 994 Gene3D Ribonuclease Inhibitor 135 223 IPR032675 -
Cone10ag0885 994 SMART serkin_6 690 942 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0885 994 Gene3D Transferase(Phosphotransferase) domain 1 767 990 - -
Cone10ag0885 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0885 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 336 625 - -
Cone10ag0885 994 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Cone10ag0885 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 659 766 - -
Cone10ag0885 994 Gene3D Ribonuclease Inhibitor 329 624 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0885 Cone-Chr10:4565453 Cone13ag0399 Cone-Chr13:3641599 4.79E-189 dispersed
Cone10ag0885 Cone-Chr10:4565453 Cone3ag0913 Cone-Chr3:4685111 1.07E-287 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81835 PF03107 C1_2 8.50E-07 CL0006 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0885 - - - 0.0