Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0905 ATGGATGGTAATAAATCCAACTCTCTAAATTGTTTTTACTTTGCTATTCTTTATGCTGCTGGGATCGTTAATGGGTATGAACCTGAGAGTGATAGTACTACAACTTGTATATTTAACTTGCAATTGAAAATTTCCGATGTGGGTTTCGGAAAAAAGGACCCTACGGGTCTTGTTTTCGGGCTAATTTGGGCCGGCATAGCTGTCTTGGTCATAGTTGTTTTGTTGGGTTTGTATTTTTGGTATGGTAGAAGGTGGAAGAGGAAGAAAATGGTTGAAGTGAGCTTAGATCTTCCGGGTTATGAAATGGAGGGACAAGGGTCTAGTAGGCCTAGGGTGAAGCCCAATACGCCAAGTTGCCGTGAAGAAAGTGATAGAATCAGATTTCAAGGGGATCTAGAGTTTTGCAATGAGGTTGAGATAATAAGTAATTTGCAGCACCGGAATCTTGTTCCGCTTCGAGGGTGTTGTGTTGTTGATGGGAATAACGATGAGAATAAGAATAATGGGGAGCAAGGAACCAGTCATAGATATCATGTTTACGATTACATGCCGAATGGAAATCTAAATGACCATTTGTTTCCTTCACCTGGTGGAACCGTAAAACAACCATTGACATGGCCTCAGAGGAAGAACATCATCTTAGACGTGGCCCGAGTTTTAGCTTATCTACACTATGGAGTCAAACCCATTGTATATCATAGAGATATTAAGGCTACCAATATACTACTTGATGTTGATGTGAGAGTTAGAGTTGCTGATTTCGGCCTTGCCAAACAAATACGAGAAGGGCAATCTCATCTGACGACCCGGGTTGCTGGGACTCACGGTTACTTGGCCCCAGAATATGCCTTCTACGGTCAACTGACTGAAAAAAGTGATGTTTATAGTTTTGGAGTCGAAAGCTCTTGA 909 41.69 MDGNKSNSLNCFYFAILYAAGIVNGYEPESDSTTTCIFNLQLKISDVGFGKKDPTGLVFGLIWAGIAVLVIVVLLGLYFWYGRRWKRKKMVEVSLDLPGYEMEGQGSSRPRVKPNTPSCREESDRIRFQGDLEFCNEVEIISNLQHRNLVPLRGCCVVDGNNDENKNNGEQGTSHRYHVYDYMPNGNLNDHLFPSPGGTVKQPLTWPQRKNIILDVARVLAYLHYGVKPIVYHRDIKATNILLDVDVRVRVADFGLAKQIREGQSHLTTRVAGTHGYLAPEYAFYGQLTEKSDVYSFGVESS 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4701371 4702397 - Conep10aG0093000.1 Cone10ag0905 446703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0905 302 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 183 300 - -
Cone10ag0905 302 SUPERFAMILY Protein kinase-like (PK-like) 128 299 IPR011009 -
Cone10ag0905 302 ProSiteProfiles Protein kinase domain profile. 97 302 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0905 302 Pfam Protein kinase domain 133 299 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0905 302 PANTHER OS01G0750732 PROTEIN 123 299 IPR050885 -
Cone10ag0905 302 SMART serkin_6 72 300 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0905 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0905 302 Gene3D Transferase(Phosphotransferase) domain 1 183 300 - -
Cone10ag0905 302 Gene3D Phosphorylase Kinase; domain 1 117 164 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0905 Cone-Chr10:4701371 Cone4ag1426 Cone-Chr4:11369690 2.28E-80 dispersed
Cone10ag0905 Cone-Chr10:4701371 Cone3ag0933 Cone-Chr3:4830994 1.24E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81837 PF00931 NB-ARC 3.90E-40 CL0023 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0905 - - - 0.0