Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0924 ATGGCTGCTACATCTGGTGCTGTGCTAAATGGGTTAACCACTCCCTTCTTGTGTGGCGGCAAGAGATCGAGCCAGGCCTTGTTCTCTGCCGCCAGAGTTGGCGGTGAAGCCACATCTCGTAAGTTGAAGCTGGTTGTAGTGGTTGCTGCTGCACCGAAGAAATCCTGGATCCCTGCTGTCAAGGGCGGTGGTAACTTCATCAACCCAGAATGGCTCGATGGCTCGCTTCCAGGTGACTTTGGGTTTGACCCATTGGGATTGGGCAAGGACCCAGCATTTCTCAAGTGGTACAGAGAAGCTGAGCTCATCCATGGGCGGTGGGCCATGGCAGCTGTAGTCGGAATATTTGTGGGCCAGGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCTGACCCAGGTGCCATCGCACCCTTCTCCTTTGGCTCGTTGCTAGGAACCCAATTGCTTCTCATGGGTTGGGTCGAGAGCAAGAGATGGGTCGACTTTTTCAACCCGGACTCACAATCAGTTGAGTGGGCCACTCCGTGGTCCAAGACTTCTGAGAACTTCGCTAATGCAACTGGAGAACAGGGCTACCCTGGTGGCAAGTTTTTCGACCCATTGAGCTTAGCGGGTACCATTAAAGACGGAGTTTACATTCCGGATACAGAGAAGCTTGAGAGATTGAAGCTGGCTGAGATCAAGCATGCAAGGCTGGCCATGTTGGCTATGCTAATTTTCTACTTTGAGGCTGGTCAGGGGAAAACACCCCTTGGCGCTCTTGGCTTGTAA 774 53.23 MAATSGAVLNGLTTPFLCGGKRSSQALFSAARVGGEATSRKLKLVVVVAAAPKKSWIPAVKGGGNFINPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTSENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDTEKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4844394 4845444 + Conep10aG0094900.1 Cone10ag0924 446722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0924 257 FunFam Chlorophyll a-b binding protein, chloroplastic 69 256 - -
Cone10ag0924 257 Gene3D Chlorophyll a/b binding protein domain 69 256 - -
Cone10ag0924 257 SUPERFAMILY Chlorophyll a-b binding protein 66 257 - -
Cone10ag0924 257 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 35 255 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cone10ag0924 257 Pfam Chlorophyll A-B binding protein 69 245 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0924 Cone-Chr10:4844394 Cone4ag0830 Cone-Chr4:5333628 9.13E-41 dispersed
Cone10ag0924 Cone-Chr10:4844394 Cone3ag0950 Cone-Chr3:4942721 1.83E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0924 K08917 - mdm:103431753 458.759