Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0938 | ATGGATAATCTATGTTGCTTCAATTTTGTTTACTCTCAGGTTGTTGGAGGGAACTCGTCATGTAGCTCAGGAAAGGGTAGAGGGCATGTGAGCCCTGTCAAGTATGGGTTTAGCTTAGTTAAAGGGAAAGCAAATCATCCCATGGAGGATTATCATGTCGCCAAGTTCATTCAGTTGCAAGGCCGGGAAGTTGGCCTCTTTGCTATATACGACGGTCATCTGGGAGATAGTGTACCTGCTTATCTACAAAAGCACCTCTTCCCTAATATTATAAAGGATGAGGAGTTTTGGACTGATACAAATAGGTCTATCTATAGAGCCTATGAGATGACGGACCAAGCAATCCTCTCGCACAGTCCGGACTTAGGAAGAGGTGGGTCCACTGCAGTTACAGCCATTCTGATCAATGGTCAGAAATTATGGGTAGCAAATGTCGGAGATTCTCGGGCAGTTATTTCAAAGAAAGGGCAGGCAGAGCAGATGACTATAGACCATGAGCCAAATACTGAGCGGGGCAGCATTGAGAACAGGGGTGGATTCGTCTCTAATATGCCAGGTGATGTGGCAAGGGTAAATGGCCAGCTGGCAGTTTCTCGAGCCTTTGGGGACAAGAACCTGAAAACACACTTGCGATCTGATCCCGACATTCAAACTGTTGATATCGGCCCTGATTACGATCTTCTTATTCTAGCAAGTGATGGTCTATGGAAGGTGATGGCAAATCAAGAAGCGGTTGATATAGCGAGAAGGACTAAAGACCCGCAAAGGGCAGCTAAGCAATTAGCAGCTGAGGCTTTGAAGCGGGAAAGTAAGGATGATATCTCAATCATAGTTGTTCGTTTCAAGAGTTGA | 852 | 45.54 | MDNLCCFNFVYSQVVGGNSSCSSGKGRGHVSPVKYGFSLVKGKANHPMEDYHVAKFIQLQGREVGLFAIYDGHLGDSVPAYLQKHLFPNIIKDEEFWTDTNRSIYRAYEMTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVISKKGQAEQMTIDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQTVDIGPDYDLLILASDGLWKVMANQEAVDIARRTKDPQRAAKQLAAEALKRESKDDISIIVVRFKS | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4906845 | 4909738 | + | Conep10aG0096300.1 | Cone10ag0938 | 446736 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0938 | 283 | CDD | PP2Cc | 33 | 281 | IPR001932 | - | |
Cone10ag0938 | 283 | SUPERFAMILY | PP2C-like | 29 | 282 | IPR036457 | - | |
Cone10ag0938 | 283 | FunFam | Probable protein phosphatase 2C 39 | 26 | 282 | - | - | |
Cone10ag0938 | 283 | Pfam | Protein phosphatase 2C | 43 | 274 | IPR001932 | - | |
Cone10ag0938 | 283 | PANTHER | PROTEIN PHOSPHATASE | 34 | 279 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone10ag0938 | 283 | SMART | PP2C_SIG_2 | 45 | 281 | IPR001932 | - | |
Cone10ag0938 | 283 | SMART | PP2C_4 | 30 | 279 | IPR001932 | - | |
Cone10ag0938 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 281 | IPR001932 | - | |
Cone10ag0938 | 283 | Gene3D | - | 28 | 283 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0938 | Cone-Chr10:4906845 | Cone4ag1335 | Cone-Chr4:10921634 | 5.28E-147 | dispersed | |
Cone4ag2028 | Cone-Chr4:14086405 | Cone10ag0938 | Cone-Chr10:4906845 | 6.23E-06 | dispersed | |
Cone10ag0938 | Cone-Chr10:4906845 | Cone3ag1093 | Cone-Chr3:29567925 | 1.63E-194 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0938 | K17506 | - | csv:101214223 | 493.812 |