Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0946 ATGGAGAGCCTCGCCCTCAACTCTCTCTCCACCTTCGCTCCTCCTTCTCTCTCCCTCCGCCGATCCCGATCCTCCTCCTCATCCTCCTCCTCATCCTCCATTCCCCAACCGCAATCAATAATAATCACCTCACCTCTACTTTCCCTCTCCTCAATCCCTACTAATCTCCTCAATTTCCCTCCAAAACCCCTCTTCTTCAATCACCTTAAAAAATCCCCCAAATTCCTACCTCCAATTCGCGCTTCTCAATCCTTAACCGCTCAATCTTCATCCCCTACCTCTCCTCCTCCTCCTCAAGGAGCGAAACCCCTCCCCTTAATAATCTCGATCGCAGTCGGCCTCCTTCTCCGATTCCTCGTTCCCAAACCGGTTGAAGTTTCATCTCAAGCATGGCAGCTACTCTCGATCTTCATCTCAACCATCGCCGGCCTCGTCTTAAGCCCCTTACCAGTCGGCGCTTGGGCGTTTCTTGGGTTAACTACATCGATCGTAACCGGAACGCTGTCTTTTTCATCTGCATTCAACGCTTTCACTAACGAGGTAATTTGGTTGATTGTGATTTCGTTCTTCTTCGCTCGTGGATTTGTCAAGACTGGATTGGGAGATAGAATCGCGACTTATTTCGTTATGTGGTTGGGAAAGAGTACTTTGGGATTGTCTTATGGGCTGACGATTAGTGAGGCTTTGATCGCTCCGGCGATGCCAAGCACTACGGCTAGGGCTGGTGGTGTGTTCTTGCCCATTATTAAGTCATTGTCTTTATCGGCAGGGAGTAAACCTGGTGATCCGTCTGCTAGGAAGATTGGGTCTTATCTAATTCAGTCTCAGTTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTAACTGCTGCAGCTCAAAACTTGCTATGCATTAAACTAGCCGAAGAACTTGGGATCGTTATTTCTAGCCCTTGGGTTTCTTGGTTCAAGGCTGCTAGTTTACCGGCACTCGTTTCTCTTCTGGTGACTCCACTAGTCTTATACAAGCTTTATCCTCCTGAAATCAAAGACACACCTGAAGCCCCTGCAATGGCTGCAAAGAAACTCGAGTGTATGGGCCCTGTCACAAAGAATGAAGGGGTCATGGTTGGAACAATGCTTCTAGCAGTTTCTCTATGGATATTTGGAGATAAGCTTGGTATCCCTAGCGTTGTTGCGGCAATGATTGGATTATCAATACTCCTTTTATTAGGAGTCCTTGATTGGGATGACTGTTTAAGTGAGAAATCAGCATGGGACACCTTAGCCTGGTTTGCGGTCCTAGTAGGCATGGCCGGTCAATTAACCAATCTCGGAATTGTAACTTGGATGTCCAAATGTGTGGCCAAGTCTCTGCAATCTTTCTCTTTAAGCTGGCAGGCTGCTTTTGGTGTTCTTCAGGCAGCTTATTTCTTGATTCACTACCTCTTTGCTAGTCAAACTGGTCATGTTGGAGCTTTATATTCTGCTTTTCTTGCTATGCATTTAGCAGCTGGGGTTCCAACTGTTCTGGCTGCTCTAGCTTTAGCTTATAATACGAATCTTTTCGGTGCTCTAACGCATTATAGTAGTGGCCAGGCTGCTGTTTACTATGGAGCTGGGTATGTAGACCTACCGGATGTGTTCAAGGTGGGATTCATTATGGCGCTTATTAATGCTGCCATATGGGGAGTCGTTGGATGTTTATGGTGGAGATTCCTGGGTCTTTATTAA 1713 46.76 MESLALNSLSTFAPPSLSLRRSRSSSSSSSSSSIPQPQSIIITSPLLSLSSIPTNLLNFPPKPLFFNHLKKSPKFLPPIRASQSLTAQSSSPTSPPPPQGAKPLPLIISIAVGLLLRFLVPKPVEVSSQAWQLLSIFISTIAGLVLSPLPVGAWAFLGLTTSIVTGTLSFSSAFNAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVMWLGKSTLGLSYGLTISEALIAPAMPSTTARAGGVFLPIIKSLSLSAGSKPGDPSARKIGSYLIQSQFQSAGNSSALFLTAAAQNLLCIKLAEELGIVISSPWVSWFKAASLPALVSLLVTPLVLYKLYPPEIKDTPEAPAMAAKKLECMGPVTKNEGVMVGTMLLAVSLWIFGDKLGIPSVVAAMIGLSILLLLGVLDWDDCLSEKSAWDTLAWFAVLVGMAGQLTNLGIVTWMSKCVAKSLQSFSLSWQAAFGVLQAAYFLIHYLFASQTGHVGALYSAFLAMHLAAGVPTVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVDLPDVFKVGFIMALINAAIWGVVGCLWWRFLGLY 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4987307 4991016 - Conep10aG0097100.1 Cone10ag0946 446744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0946 570 NCBIfam DASS family sodium-coupled anion symporter 122 564 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone10ag0946 570 MobiDBLite consensus disorder prediction 1 36 - -
Cone10ag0946 570 Pfam Sodium:sulfate symporter transmembrane region 105 569 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone10ag0946 570 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 15 570 IPR030676 GO:0005215(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0946 Cone-Chr10:4987307 Cone18ag0105 Cone-Chr18:543277 4.20E-159 dispersed
Cone10ag0946 Cone-Chr10:4987307 Cone3ag1151 Cone-Chr3:30131087 4.89e-312 wgd
Cone10ag0946 Cone-Chr10:4987307 Cone3ag1088 Cone-Chr3:29508565 0 wgd
Cone10ag0946 Cone-Chr10:4987307 Cone8ag1013 Cone-Chr8:9423983 7.14E-281 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0946 - - - 0.0