Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0951 ATGGCTGGTCAATCTGATAACAGTCTCTCACTCTTTTCCGCTGAAGAGGTTGAGTTTGTAGCTGAGGATGAAATGATTGAAATAGTGCCCAACGTGAGGATGGATTCGCTCAATTTGATTTGTGGGGATTATGGTCCATTCTCTCCCCAAGTTGTCGCACAAGTGCCTCTCTGGTTAGCAATTGCAATGAAGAAGAGAGGAAAATGTGCGATTCGGCCTCCGGAATGGATGTCCATTGACAAATTGACCCAGATTTTGGAAGCAGAACGTGAGTCTCAAGGAGCTTTTCAAATTCTACCATTCCATTATGTCGAAATCTCTAAACTCCTTTTTGACCATGCACGGGACGATATTCCTGACATATATATGGTGAGGTCTCTTATAGAGGATATCAGAGATGTTAGGTTTCATAAAGTTGAAACTAGTTTAGAGTCAATCGATACACGAACATCTGCAGTAAAGATTAAAGATCTTTCAGCTATGGAGGTAAATATAGTTCGTCCGTTTGTTGGGAAAGCCCTACAGGCCATCTATAAGCATGGTAATCCAGCTTTGGTCCCAGAAGAAGAGAAAATATCTAACAGACAGCCTCAAGAACCTGATCCTGGACAAAGGCGGATCTTGCGAAGAAGATAG 636 42.3 MAGQSDNSLSLFSAEEVEFVAEDEMIEIVPNVRMDSLNLICGDYGPFSPQVVAQVPLWLAIAMKKRGKCAIRPPEWMSIDKLTQILEAERESQGAFQILPFHYVEISKLLFDHARDDIPDIYMVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGKALQAIYKHGNPALVPEEEKISNRQPQEPDPGQRRILRRR 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5032727 5034840 + Conep10aG0097600.1 Cone10ag0951 446749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0951 211 Pfam GINS complex protein helical bundle domain 71 170 IPR021151 -
Cone10ag0951 211 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 198 IPR007257 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)
Cone10ag0951 211 MobiDBLite consensus disorder prediction 192 211 - -
Cone10ag0951 211 SUPERFAMILY PriA/YqbF domain 12 71 - -
Cone10ag0951 211 Gene3D - 12 77 - -
Cone10ag0951 211 PIRSF GINS_PSF2 2 211 IPR007257 GO:0005634(InterPro)|GO:0006260(InterPro)
Cone10ag0951 211 FunFam DNA replication complex GINS protein PSF2 78 194 - -
Cone10ag0951 211 MobiDBLite consensus disorder prediction 188 211 - -
Cone10ag0951 211 CDD GINS_A_psf2 66 182 - -
Cone10ag0951 211 CDD GINS_B_Psf2 13 74 - -
Cone10ag0951 211 Gene3D - 78 192 - -
Cone10ag0951 211 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Cone10ag0951 211 SUPERFAMILY GINS helical bundle-like 73 182 IPR036224 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0951 Cone-Chr10:5032727 Cone3ag1084 Cone-Chr3:29482573 3.89E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0951 K10733 - csv:101212053 355.91