Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0987 ATGGGTCTTATCCCAAATCAAAGAGGCTCGAGAACAGGAGGAGGGACCAGTCCCGAAAGCTTACCCGTAATCAACAACAACAATTGCGGTGGGATTTCTCCGGTCGGGACGAAGAAGAAATGGACGTACAATCTACTGCCGTTGTTCGTCGTTCTTGTGATCATAGCAGAGATCACTTTCCTTGGCGGCCTCGACGTGGGTAAGAACGCCGCTCTCGTCGATACCTGGGCCGACTTGTTCTACAGGTCCGAGGGCGTTGCCGTTGTTGCTGATCTGGGCCTTGGAGTGTTGGGGGGTAACGATGATCGGAGTTTTGATTCGGAATCGGAAAGTTGTGAGGATTGGTTGGAGAAGGTGGATTCTGTGGCTTACTCTAGAGACTTCGGAAAGAATCCCATCTTGGTTTCTGGTGATGAAAAGGACTGGAAATCTTGTGACGTGGGATGTGAATTTGAAATGAATACTGGTAAGGATGCTGACGCTACATTTGGGTTACCTCAAAAACGGGGCAGACCTAGTATTCTCCGATCAATGGAATCTTCCAAGTACTATATAGACAACAATATTGATTTCGCACGACGAAAGGGTTATAGTATTATAATGACAACGAGTCTGTCTTCGGACGTTCCGGTCGGATATTTTTCTTGGGCTGAGTATGATATCATGGCTCCAGTCCTCCCCAAGACTGAAACCGCCCTTGCAGCTGCTTTCATTTCTAATTGTGTTGCTCGTAATTTTCGCTTGCAAGCTCTTGAGGGTCTTGAAAAGATGAATATCAATATCGATTCTTATGGTGCTTGCCACAAGAATCATGATGAACAAGTGGACAAAGTGAAGACTCTAAAGCGCTACAAATTTAGCCTGGCTTTTGAGAATTCGAATGAGGAGGATTATGTGACTGAAAAATTTTTCCAGTCCCTAGTTGCAGGAGCTATTCCTGTTGTAGTTGGTGCACCAAATATACAAGATTTTGCTCCTTCTCCTGGTTCTCTTTTGCATATTGGGGAGCTTTCGGATGTTGAGTCAGTTGCCAAGTCAATGGCGTATCTTGCCAATAATCCAGATGCATTCAACCAGTCATTGAGGTGGAAATATGAGGGTCCGTCTGATTCTTTCAAGGCATTAGTGGATATGGCATCAGTACACTCATCATGTCGCCTTTGCATTCAGTTGGCAACTGAAATCTGGGAGAGAGAAGAAAAGAGTCTCGGATTCCAAAAACGGCCTTGCAAGTGCACAAGAGGCTCGGAAACAGTGTATCACTTATACATTAGAGAAAGAGGGAGGTTTCATATGGAGTCCATTTTTTTAAGGTCAGGGAATTTGACCTTGGAGGCTTTGGAGATGGAAATCCATACAAAATTCGGTTCTCGGAAACATAAACCGGTATGGAAAGATGAAAGACCAGAAAGCATTCAAGGAGGGGATGAACTTAAAATATATAAAATATATCCTCTTGGGTTGACACAAAGGCAAGCCCTTTATACCTTCACATTTAAAGTAGATGATTTTACAAGGCATGTGAAAAATAACCCCTGCGCAAAGTTTGAGGTCATTTTCGTCTAA 1566 43.93 MGLIPNQRGSRTGGGTSPESLPVINNNNCGGISPVGTKKKWTYNLLPLFVVLVIIAEITFLGGLDVGKNAALVDTWADLFYRSEGVAVVADLGLGVLGGNDDRSFDSESESCEDWLEKVDSVAYSRDFGKNPILVSGDEKDWKSCDVGCEFEMNTGKDADATFGLPQKRGRPSILRSMESSKYYIDNNIDFARRKGYSIIMTTSLSSDVPVGYFSWAEYDIMAPVLPKTETALAAAFISNCVARNFRLQALEGLEKMNINIDSYGACHKNHDEQVDKVKTLKRYKFSLAFENSNEEDYVTEKFFQSLVAGAIPVVVGAPNIQDFAPSPGSLLHIGELSDVESVAKSMAYLANNPDAFNQSLRWKYEGPSDSFKALVDMASVHSSCRLCIQLATEIWEREEKSLGFQKRPCKCTRGSETVYHLYIRERGRFHMESIFLRSGNLTLEALEMEIHTKFGSRKHKPVWKDERPESIQGGDELKIYKIYPLGLTQRQALYTFTFKVDDFTRHVKNNPCAKFEVIFV 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6682381 6686028 + Conep10aG0101300.1 Cone10ag0987 446785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0987 521 Gene3D - 178 371 IPR038577 -
Cone10ag0987 521 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 179 371 - -
Cone10ag0987 521 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 71 494 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Cone10ag0987 521 MobiDBLite consensus disorder prediction 1 22 - -
Cone10ag0987 521 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 119 396 - -
Cone10ag0987 521 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 230 395 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0987 Cone-Chr10:6682381 Cone12ag1085 Cone-Chr12:8882647 1.12E-258 wgd
Cone10ag0987 Cone-Chr10:6682381 Cone3ag1179 Cone-Chr3:30459668 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0987 K00753 - gmx:100792811 708.368