Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1013 ATGGATTCAGAATCCCCTGATTCCTCAGCAGTAATTCCTCCCAAATCTACTAATGCCAAACCTTCTGAGTCACAACCCCAAGCAGCAGATGATTCAAGATCGAAGAGCTCTGCTCCTAGTATTTCATCAAAGTTATCTGCTTCAGGAATAACATCATGGGCCAAAAATTTGACAATTCCACAGCCATTGTCACCCACTCAAGATGAATCCCCTACTGGAAATTCTGCAAAGTCAACGTTTTCACGTTTTACTACTAGCTTAGGCCTGCGCTTGTCTCCTAAATCTCCTGTACAGGATGATAGCCCTGATGCTACTTCAACTACTGCACAGCCTGGCTTTTTTGGAACAATTACAAAGGGATTGGTGGATTCTTCTAAGAGTGCTGTAAAGGCCGTGCAGGTGAAAGCTCGGCATGCTGTGTCACAAAATAAAAGGAGATATCAGGAAGGCGGATTTGATTTGGATATGTCATATATCACAGAGAATATAATTGCTATGGGGTTCCCCGCTGGGGATATGAGCTCAGGGTTTCTTGGATATGTTGAGGGTTTCTACCGGAACCACATGGAAGAAGTTATCAAGTTCTTTGAAACTCACCATAAGGGAAAGTACAAAGTTTACAATCTTTGTTCCGAGAGACTGTATGATGCATCATTACTTGAAGGAAAGGTTGCTTGTTTTCCTTTTGATGACCACAATTGCCCTCCAACTCAACTGATAATATCATTCTGTCAAAGTGCTTATTCGTGGTTGAAGGAAGATATTGAAAATGTTGTGGTAGTGCATTGCAAGGCGGGAATGGCAAGGACAGGATTGATGATATGTAGTCTTCTTCTATTCCTGAAGTTCTTTCCAACTGCAGAGGAGTGCATCGACTACTACAACCAGAAAAGGTGTTTTGATGGTAAAGGCCTTGTTCTGCCAAGTCAGATACGATATGTTAAATATTTCGAGCGTATTTTAACGTACTTCAATGGTGAGAATCCACCTGGACGGAGGTGCATGCTTAGAGGATTCCGCCTCCACAGGTGTCCCTATTGGATCAGGCCCTCTGTTACTGTCTCCGATCATAGCGGGGTTCTTTTCTCATCTAAGAAACATCCAAGAACCAAGGATCTATCGCCTGAAGATTTTTGGTTTAGTGCACCAAAGAAGGGAGTAATGGTGTTTGCTCTACCTGGTGAACCCGGTATAGCTGAATTGAAGGGGGACTTCAAGATCCATTTCCATGACCGGCAAGGAGATTTCTACTGTTGGCTAAACACAACCATGACAGAAAATCGAAAAATTCTCACCACCAGCGAGCTTGATGGGTTTGAGAAGAGGAAACTACCATCTCCAGGATTCCAAGTTGAGGTAGTTCTAGTTGATCATAATGCCAACATTCCAGCAATACCACCTATGCTGAATATTACAACCAAGAAAGATGAAAGCTCAGTTTCAATACCCACTTTAACCAATAACGACAACTCAATTCCTCTGAACCAGAATGAAAATCCCGACTCAAATGACAAAGATGATGTCTTTTCAGACAATGAAGGAGATGAAAATGCCTCTTCACAGAGCAAGATAGAAGCTACATCCATTCCGGTAAAAGCTCCTACAACCAATCCCCCCTCCAATTCTAAAACTAGTGCAAGTTCGGACCGAGTTTCAAGCATAACACAAGCGACAAAACAAGTGTCTCTTGGGACTAGTGTGTCAACACAAGTTCAGACTAACAATAGTGAGCCGAAAAGCGAGGTAAGGGGAGCTGTTTCTGAGGTTTCGAACTCGACTAGTGAGTTTAAGGTTATGGCTGCCGATGCGTCTGTTTTCACATTTGGAGACGAGGAAGATTATGAGAGTGAGTAA 1854 42.83 MDSESPDSSAVIPPKSTNAKPSESQPQAADDSRSKSSAPSISSKLSASGITSWAKNLTIPQPLSPTQDESPTGNSAKSTFSRFTTSLGLRLSPKSPVQDDSPDATSTTAQPGFFGTITKGLVDSSKSAVKAVQVKARHAVSQNKRRYQEGGFDLDMSYITENIIAMGFPAGDMSSGFLGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLLEGKVACFPFDDHNCPPTQLIISFCQSAYSWLKEDIENVVVVHCKAGMARTGLMICSLLLFLKFFPTAEECIDYYNQKRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPGRRCMLRGFRLHRCPYWIRPSVTVSDHSGVLFSSKKHPRTKDLSPEDFWFSAPKKGVMVFALPGEPGIAELKGDFKIHFHDRQGDFYCWLNTTMTENRKILTTSELDGFEKRKLPSPGFQVEVVLVDHNANIPAIPPMLNITTKKDESSVSIPTLTNNDNSIPLNQNENPDSNDKDDVFSDNEGDENASSQSKIEATSIPVKAPTTNPPSNSKTSASSDRVSSITQATKQVSLGTSVSTQVQTNNSEPKSEVRGAVSEVSNSTSEFKVMAADASVFTFGDEEDYESE 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7023423 7028799 + Conep10aG0104000.1 Cone10ag1013 446811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1013 617 CDD PTP_PTEN 155 320 IPR045101 GO:0016791(InterPro)
Cone10ag1013 617 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 238 298 IPR000387 GO:0016311(InterPro)
Cone10ag1013 617 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 158 325 IPR029021 -
Cone10ag1013 617 Pfam PTEN2, C2 domain 331 459 - -
Cone10ag1013 617 Gene3D - 383 460 - -
Cone10ag1013 617 ProSiteProfiles C2 tensin-type domain profile. 331 458 IPR014020 -
Cone10ag1013 617 Pfam Polymorphic toxin system, DSP-PTPase phosphatase 226 279 - -
Cone10ag1013 617 ProSitePatterns Tyrosine specific protein phosphatases active site. 261 271 IPR016130 GO:0016311(InterPro)
Cone10ag1013 617 MobiDBLite consensus disorder prediction 480 499 - -
Cone10ag1013 617 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 401 455 IPR035892 -
Cone10ag1013 617 MobiDBLite consensus disorder prediction 1 111 - -
Cone10ag1013 617 MobiDBLite consensus disorder prediction 480 585 - -
Cone10ag1013 617 Gene3D Protein tyrosine phosphatase superfamily 130 327 IPR029021 -
Cone10ag1013 617 ProSiteProfiles Phosphatase tensin-type domain profile. 145 324 IPR029023 -
Cone10ag1013 617 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 132 573 IPR051281 GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)
Cone10ag1013 617 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 130 327 - -
Cone10ag1013 617 MobiDBLite consensus disorder prediction 514 585 - -
Cone10ag1013 617 SMART PTEN_C2_2 329 457 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1013 Cone-Chr10:7023423 Cone8ag0143 Cone-Chr8:749391 3.95E-232 dispersed
Cone10ag1013 Cone-Chr10:7023423 Cone3ag0992 Cone-Chr3:28728692 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1013 K01110 - csv:101222304 883.634