Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1053 ATGTCTCTCTCTTCAAACCCTACCGCTCCCTCTAGCTTGCTCTGCGCCGAAGAACTCGACGACGACGTCGTCGTCGTCTCCAACAATGACGACGCGTCAATCTACGTACAGTCTTTGCTTCAATCTCCACCGTCCGATGAGGATTCCACCATATCCAGACTCGTCGTTTACGAGTCTGATCACATGCCCCATCCAGATTATCTGCGACGCTGCCTTGATCGTTCGATCGACATCACTGCTCGCCAGGACACCATCAACTGGATCTTGAAAGTGCACTCATATTATAGTTTCAAAGCAGTTACTGCTCTTCTCTCAGTCAACTACTTTGACCGCTTTCTCTCCACAGATCCCCTGCCGCAAAAAGGATGGCCATTTCAACTTCTAGCAGTGGCGTGCTTGTCATTAGCGGCAAAAATGGAGGAGGATCGGATCCCACTGCTCTTAGATCTCCAAATTTTCGAACCGGAATTCGTGTTCGAATCCAAAACGGTGCAGAGAATGGAGGTTTTGGTTATGGCAAAGCTCGACTGGAGACTGCGATCTATTACACCGTTCGATTTTCTCAACGATTTCATCTCTAAGCTTTCGTCTTCTTCCGCCATTAACGATCTTTCTCCGATTTTCCAAGCTTCCTACGATCTCATTCTCAGCACCACTCGTGCTGTCGATTTCCTGGTTTTTTCGCCGTCGACGGTGGCGGCGGCCGCTGTCCTCTGTGCGGCGCGGGGGCTATTCTATAAAATGGAAATATCTTTTTTGGCGGGAAATTCGAAGTCGTTGAAAAATGACAACTTTTTTGGGTCAGGAAATGGTGAGAAGCTGTCACCAACTAATGGAGCGGTATGTGATGGACACGTGTCCAGCAACTCTTCAAAGTGA 879 48.58 MSLSSNPTAPSSLLCAEELDDDVVVVSNNDDASIYVQSLLQSPPSDEDSTISRLVVYESDHMPHPDYLRRCLDRSIDITARQDTINWILKVHSYYSFKAVTALLSVNYFDRFLSTDPLPQKGWPFQLLAVACLSLAAKMEEDRIPLLLDLQIFEPEFVFESKTVQRMEVLVMAKLDWRLRSITPFDFLNDFISKLSSSSAINDLSPIFQASYDLILSTTRAVDFLVFSPSTVAAAAVLCAARGLFYKMEISFLAGNSKSLKNDNFFGSGNGEKLSPTNGAVCDGHVSSNSSK 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7320857 7322893 + Conep10aG0108000.1 Cone10ag1053 446851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1053 292 Gene3D - 64 180 - -
Cone10ag1053 292 SMART cyclin_7 86 173 IPR013763 -
Cone10ag1053 292 Pfam Cyclin, N-terminal domain 57 180 IPR006671 -
Cone10ag1053 292 SUPERFAMILY Cyclin-like 46 179 IPR036915 -
Cone10ag1053 292 CDD CYCLIN_AtCycD-like_rpt1 80 177 - -
Cone10ag1053 292 Pfam Cyclin, C-terminal domain 182 244 IPR004367 -
Cone10ag1053 292 PANTHER CYCLINS 47 243 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cone10ag1053 292 FunFam D6-type cyclin 64 180 - -
Cone10ag1053 292 Gene3D - 54 245 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1053 Cone-Chr10:7320857 Cone12ag0627 Cone-Chr12:5632982 3.61E-54 dispersed
Cone10ag1053 Cone-Chr10:7320857 Cone3ag1037 Cone-Chr3:29188468 8.34E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1053 K18810 - gmx:100798996 260.766