Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag1053 | ATGTCTCTCTCTTCAAACCCTACCGCTCCCTCTAGCTTGCTCTGCGCCGAAGAACTCGACGACGACGTCGTCGTCGTCTCCAACAATGACGACGCGTCAATCTACGTACAGTCTTTGCTTCAATCTCCACCGTCCGATGAGGATTCCACCATATCCAGACTCGTCGTTTACGAGTCTGATCACATGCCCCATCCAGATTATCTGCGACGCTGCCTTGATCGTTCGATCGACATCACTGCTCGCCAGGACACCATCAACTGGATCTTGAAAGTGCACTCATATTATAGTTTCAAAGCAGTTACTGCTCTTCTCTCAGTCAACTACTTTGACCGCTTTCTCTCCACAGATCCCCTGCCGCAAAAAGGATGGCCATTTCAACTTCTAGCAGTGGCGTGCTTGTCATTAGCGGCAAAAATGGAGGAGGATCGGATCCCACTGCTCTTAGATCTCCAAATTTTCGAACCGGAATTCGTGTTCGAATCCAAAACGGTGCAGAGAATGGAGGTTTTGGTTATGGCAAAGCTCGACTGGAGACTGCGATCTATTACACCGTTCGATTTTCTCAACGATTTCATCTCTAAGCTTTCGTCTTCTTCCGCCATTAACGATCTTTCTCCGATTTTCCAAGCTTCCTACGATCTCATTCTCAGCACCACTCGTGCTGTCGATTTCCTGGTTTTTTCGCCGTCGACGGTGGCGGCGGCCGCTGTCCTCTGTGCGGCGCGGGGGCTATTCTATAAAATGGAAATATCTTTTTTGGCGGGAAATTCGAAGTCGTTGAAAAATGACAACTTTTTTGGGTCAGGAAATGGTGAGAAGCTGTCACCAACTAATGGAGCGGTATGTGATGGACACGTGTCCAGCAACTCTTCAAAGTGA | 879 | 48.58 | MSLSSNPTAPSSLLCAEELDDDVVVVSNNDDASIYVQSLLQSPPSDEDSTISRLVVYESDHMPHPDYLRRCLDRSIDITARQDTINWILKVHSYYSFKAVTALLSVNYFDRFLSTDPLPQKGWPFQLLAVACLSLAAKMEEDRIPLLLDLQIFEPEFVFESKTVQRMEVLVMAKLDWRLRSITPFDFLNDFISKLSSSSAINDLSPIFQASYDLILSTTRAVDFLVFSPSTVAAAAVLCAARGLFYKMEISFLAGNSKSLKNDNFFGSGNGEKLSPTNGAVCDGHVSSNSSK | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 7320857 | 7322893 | + | Conep10aG0108000.1 | Cone10ag1053 | 446851 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag1053 | 292 | Gene3D | - | 64 | 180 | - | - | |
Cone10ag1053 | 292 | SMART | cyclin_7 | 86 | 173 | IPR013763 | - | |
Cone10ag1053 | 292 | Pfam | Cyclin, N-terminal domain | 57 | 180 | IPR006671 | - | |
Cone10ag1053 | 292 | SUPERFAMILY | Cyclin-like | 46 | 179 | IPR036915 | - | |
Cone10ag1053 | 292 | CDD | CYCLIN_AtCycD-like_rpt1 | 80 | 177 | - | - | |
Cone10ag1053 | 292 | Pfam | Cyclin, C-terminal domain | 182 | 244 | IPR004367 | - | |
Cone10ag1053 | 292 | PANTHER | CYCLINS | 47 | 243 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cone10ag1053 | 292 | FunFam | D6-type cyclin | 64 | 180 | - | - | |
Cone10ag1053 | 292 | Gene3D | - | 54 | 245 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag1053 | Cone-Chr10:7320857 | Cone12ag0627 | Cone-Chr12:5632982 | 3.61E-54 | dispersed | |
Cone10ag1053 | Cone-Chr10:7320857 | Cone3ag1037 | Cone-Chr3:29188468 | 8.34E-137 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag1053 | K18810 | - | gmx:100798996 | 260.766 |