Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1070 ATGTTTAGACGATCACCAACTAGAAACAACAGGTCGAAAGGCAGCATCAAGGGGAAGCATGTTCTACAAATCTGTTTATTGCTTGGGATTTGCTTTTGGTTAATTTACCAAGTGAAGCACTCCCATGATAAGAAGAAAGAGTTTGATGAGAAGGATTCTTCTTCAAGATTGTCGATGAAAAGCGAGAGTGATGATGGGAAAATAGTTAAACTTGGAAGGAAAGATCTTCATCCTCGTATAGAAGAGGAGGAAGTTAATAAGAGTGAAAGCCGTGAAGAAGACGACGAAGAAGAAAACAGAGGAGAGGAAGAACAGAAAAAGAATGAAGTAGGAGAAGAGCAAGAGAAAGAAGGTAAAGATCAAGGAGAAGAAAGGAGGAATGTGGTAGAAGATGAAGAGGAAGAGGAAGAAGAGAAACAAGAAGGACAAAGGGAGAAAGTAGAAGAGGAAGGGGAAGAAGAGCAAAGAGAAGAAAAGAACGGAGAAGTAGAAGAAGAACATGAACAAGAGGAAGAAGAAATTGAGAAGAAAGAGACGGAAGAGGATGAGGAGAGAGGAGGTGGAGATGATGAGATAGATAGACACGATCAAGAGAAGGCAGATTCTGAACCCGAACACGAAGAGGAAGAAGAAAAGGAAAAAGAAGAGGAAGGTGATGACAAGAAGACAGGGGAAAGGATTGAGGAGGAAGAAGAGAAAGAGAGAGAGAAAGAGAAAGGAGGTGAACATGAAAACGAGCATGAGGCAAGAGAGGAGCAATACAAGGCTGATGATGCTTCTAGTGCGGTGGCCCACAATATCCATTCAACGAGCACCAAAACAGCGCAAGTGAGTTTTGAGAAAATGGACAATGTATCAAGAAGCATTGTCAAGGGGGAAATTAATGGGATCCCTAATGGATCAAGGTTGATGGAGGAAAATGTTACTTCTGCAGAAAATGGTAACTTTTCCAGTCCCTTGGATGACTCTCCCCTCAATTCAACCCTAGCTACCCATTCTAATGATCTTCCAGAAGGGAGCAATAATTCCTCAGAATCTTCTGGTTTTTCCCAGAAGAGCAGTCTAAATGAAACTGCAATTACTTCAGATCTTACTCAAAATTCTACAGTTTTGGTTAAAGCTGAAAATGAAAATGTATCTTCTGAAACTGAATCTGATGCATTGGAAGTGATATTAAGTTCCAACACAACAACTGTGAATAGGGAAGATACTGCAGGGAATGACGATTCTGGCAGTATCGATGACTCAGGCAGGGCAGGTGATAAGTCTAATGAATCTGAAGGAGGGCCCCGGGATGTAGTTCAAGATGACCCAATTGATTCCTCGGATTTACATGCTACAGAAGATGTGAAAGATGATCGTGTGGATCTTGATACGTTACCGGATATTAGAACGGATGTTAATAATAATAGTATTGAAGAAAGTGCAGCTGAATGA 1437 41.06 MFRRSPTRNNRSKGSIKGKHVLQICLLLGICFWLIYQVKHSHDKKKEFDEKDSSSRLSMKSESDDGKIVKLGRKDLHPRIEEEEVNKSESREEDDEEENRGEEEQKKNEVGEEQEKEGKDQGEERRNVVEDEEEEEEEKQEGQREKVEEEGEEEQREEKNGEVEEEHEQEEEEIEKKETEEDEERGGGDDEIDRHDQEKADSEPEHEEEEEKEKEEEGDDKKTGERIEEEEEKEREKEKGGEHENEHEAREEQYKADDASSAVAHNIHSTSTKTAQVSFEKMDNVSRSIVKGEINGIPNGSRLMEENVTSAENGNFSSPLDDSPLNSTLATHSNDLPEGSNNSSESSGFSQKSSLNETAITSDLTQNSTVLVKAENENVSSETESDALEVILSSNTTTVNREDTAGNDDSGSIDDSGRAGDKSNESEGGPRDVVQDDPIDSSDLHATEDVKDDRVDLDTLPDIRTDVNNNSIEESAAE 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7427975 7430613 - Conep10aG0109700.1 Cone10ag1070 446868

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1070 478 MobiDBLite consensus disorder prediction 151 179 - -
Cone10ag1070 478 MobiDBLite consensus disorder prediction 463 478 - -
Cone10ag1070 478 MobiDBLite consensus disorder prediction 101 126 - -
Cone10ag1070 478 PANTHER MYB-LIKE PROTEIN X 146 478 - -
Cone10ag1070 478 MobiDBLite consensus disorder prediction 414 461 - -
Cone10ag1070 478 Coils Coil 226 246 - -
Cone10ag1070 478 Coils Coil 119 184 - -
Cone10ag1070 478 MobiDBLite consensus disorder prediction 43 279 - -
Cone10ag1070 478 MobiDBLite consensus disorder prediction 216 258 - -
Cone10ag1070 478 Coils Coil 80 105 - -
Cone10ag1070 478 MobiDBLite consensus disorder prediction 302 406 - -
Cone10ag1070 478 MobiDBLite consensus disorder prediction 291 478 - -
Cone10ag1070 478 MobiDBLite consensus disorder prediction 263 279 - -
Cone10ag1070 478 MobiDBLite consensus disorder prediction 180 202 - -
Cone10ag1070 478 MobiDBLite consensus disorder prediction 43 86 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1070 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1070 Cone-Chr10:7427975 Cone9ag1411 Cone-Chr9:10485369 1.63E-15 dispersed
Cone10ag1070 Cone-Chr10:7427975 Cone3ag1052 Cone-Chr3:29260597 6.61E-136 wgd
Cone10ag1070 Cone-Chr10:7427975 Cone6ag1486 Cone-Chr6:11803253 9.08E-15 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g787 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1052 Cone10ag1070 . . . . . . . . . . . . Sed07g1153 . Cmo16g00317 . . . . Cpe14g00247 Cpe01g00381 Bhi11g01093 Tan01g0597 Cmetu07g1866 . Hepe07g0387 Mch10g0400 . . . . . . . . . . . Cme07g02218
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001422 2 2 3 1 1 2 4 2 2 3 2 2 4 1 0 3 2 4 4 2 1 2 2 2 2 2 2 5 3 1 68