Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1105 ATGGGAGACGCCGCCCGCGGAGGGTGCTGTCCGCCGATGGATCTCTTCCGGTCGGAGCCGATGCAGCTGATTCAGCTCATCATCCCAATCGAGTCTGCTCACCTCACCGTTTCCTACCTCGGCGACCTCGGTCTTCTTCAGTTCAAAGATCTCAATACAGAGAAAAGCCCATTTCAGCGAACTTATGCTGCTCAGATTAAAAAATGTGGAGAGATGGCTCGCAAATTGCGATTTTTCAAGGAGCAGATGTCAAAGGCTGGGTTAACCCCCAAAAGCTCCAAGACAGGTGTAGGAATCAGTGTGGATGATCTAGAGGTCCAACTTGGTGAACTTGAGGCCGAGCTTATTGAAATAAATGCTAATGGTGACAAGTTGCAACGTTCTTACAATGAACTCAGAGAATATAAGCTTGTTCTGCAGAAGGCTGGTGAATTTTTTCGAACTACTCAAAACAGTGCAATAGAGCTGCAGAGAGAATATGAATCACGTCGTATTGGTGAAGAATCCTTAGATACACCACTGTTGTTGGAACAAGAAACATCAACTGATCCATCAAAGCAAGTTAAGCTAGGGTTTCTCACTGGCCTTGTTCCTAGGGACAAGTCGCTAGCATTTGAGCGGATTCTATTTCGGGCTACAAGGGGGAATATGTTTTTAAAGCAGGCTGAGGTTGAGGATCCTGTCACCGATCCTGTTTCTGGAGAGAAGATTGAGAAAAATGTGTTTGTTGTTTTCTACTCTGGAGAAAGAGCAAAGAACAAATTTCTTAAAATATGCGAGGCTTTCGGGGCAAGTCGTTACCCTTTTCCTGAAGAACTAGGCAGGCAAGCACAAATGATTACTGAGGTATCAGGAAGACTCTCAGAGCTGAAGACTACAGTAGATGTGGGAATGCTCCACCGGGAAAATTTGTTGCGCACTATTGACGATAAGTTTGAGCAATGGAACCTTCTGGTGAAGAAAGAAAAATCCATATACCATACCTTGAACATGCTCAGCCTTGATGTGACAAAAAAGTGTCTTGTCGCTGAGGGGTGGAGTCCTGTTTTTGCATCAAAACAGATCCAAGACGCACTCCAGCGGGCAGCATTTGATTCCAACTCCCAGGTTGGATCCATTTTCCAAGTTCTACACACAACAGAGCCTCCACCTACCTTTTTCCGCACAAACAAATTCACTTCTTCTTTTCAAGAAATTGTTGATGCATATGGGGTGGCTAAGTATCAAGAAGCGAATCCTGCTGTATATACTATTGTTACATTCCCGTTTCTTTTTGCTGTCATGTTTGGTGATTGGGGGCATGGAATATGTTTGTTACTTGTAACACTTTACTTCTTAGGCAGGGAAAGAAAGCTATCCAATCAGAAGCTTGGGGATATCATGGAAATGACTTTCGGCGGGCGCTATGTGATTATGCTGATGGCGATCTTTTCTATCTACACTGGTCTAATCTATAATGAGTTCTTTTCTGTCCCTTTTGAACTGTTTGGCCGCTCAGCATATGCATGCCGTGACCTTGATTGCAAAGATGCTACGACAGTAGGGTTAATCAAAGTGCGTCCCACCTATCCATTTGGTTTGGACCCTGTATGGCATGGCAGTCGCAGCGAGCTTCCATTCCTCAACTCTTTGAAGATGAAAATGTCAATCCTTCTTGGGGTTGCACAAATGAACCTTGGAATCATCATAAGCTATTTCAATGCCAAATTCTTTAAGAATAGCATTAATATATGGTATCAATTTCTGCCGCAGTTGATATTTCTAAACAGTCTTTTTGGCTACTTGTCCCTCCTCATCATCATTAAGTGGTGTACTGGTTCAAAAGCAGATTTATACCATGTAATGATAAACATGTTTCTGAGTCCCACTGATGATCTAGGAGAAAACCAGCTTTTTCCTGGCCAAAGAACCACTCAACTTGTGTTGCTTTTGCTGGCCCTTATTGCTGTTCCCTGGATGCTTATTCCAAAGCCTTTTCTCTTGAAGAAACAGCACCAAGAGAGGCACCAAGGCCAATCTTATGTGCCACTTCAAGGAGCAGAGAATGAACTTTCATTGGATTCACATCATCATTCCAGTGGGCATGAGGAGGGGCATGGGGAGTTTGAATTCAGTGAAGTTTTCGTGCATCAACTTATACATACCATAGAATTTGTTCTCGGTGCAGTGTCTAATACAGCCTCATACCTTCGGCTATGGGCCCTGAGTCTTGCTCACTCGGAACTGTCAAGTGTATTTTACGAAAAAGTTCTTCTTCTGGCTTGGGGATACAACAATTGGATTATCCTTATTGTGGGGTTAATCGTCTTTGTATTTGCTACCGTCGGAGTATTACTGGTGATGGAAACCCTAAGCGCTTTCCTTCACGCCCTTCGGCTCCACTGGGTGGAGTTCCAAAACAAGTTTTACGAGGGAAATGGCTATAAATTCTTCCCTTTTGCATTTTCGCTGATCGATAATGAAGATGAGTGA 2472 43.65 MGDAARGGCCPPMDLFRSEPMQLIQLIIPIESAHLTVSYLGDLGLLQFKDLNTEKSPFQRTYAAQIKKCGEMARKLRFFKEQMSKAGLTPKSSKTGVGISVDDLEVQLGELEAELIEINANGDKLQRSYNELREYKLVLQKAGEFFRTTQNSAIELQREYESRRIGEESLDTPLLLEQETSTDPSKQVKLGFLTGLVPRDKSLAFERILFRATRGNMFLKQAEVEDPVTDPVSGEKIEKNVFVVFYSGERAKNKFLKICEAFGASRYPFPEELGRQAQMITEVSGRLSELKTTVDVGMLHRENLLRTIDDKFEQWNLLVKKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFASKQIQDALQRAAFDSNSQVGSIFQVLHTTEPPPTFFRTNKFTSSFQEIVDAYGVAKYQEANPAVYTIVTFPFLFAVMFGDWGHGICLLLVTLYFLGRERKLSNQKLGDIMEMTFGGRYVIMLMAIFSIYTGLIYNEFFSVPFELFGRSAYACRDLDCKDATTVGLIKVRPTYPFGLDPVWHGSRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNAKFFKNSINIWYQFLPQLIFLNSLFGYLSLLIIIKWCTGSKADLYHVMINMFLSPTDDLGENQLFPGQRTTQLVLLLLALIAVPWMLIPKPFLLKKQHQERHQGQSYVPLQGAENELSLDSHHHSSGHEEGHGEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNWIILIVGLIVFVFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGNGYKFFPFAFSLIDNEDE 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7840508 7850310 + Conep10aG0113400.1 Cone10ag1105 446903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1105 823 PIRSF ATP6V0A1 11 823 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
Cone10ag1105 823 Coils Coil 101 128 - -
Cone10ag1105 823 PANTHER VACUOLAR PROTON ATPASES 13 821 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
Cone10ag1105 823 Pfam V-type ATPase 116kDa subunit family 39 815 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1105 Cone-Chr10:7840508 Cone20ag0107 Cone-Chr20:482563 0 dispersed
Cone10ag1105 Cone-Chr10:7840508 Cone3ag1221 Cone-Chr3:30955706 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1105 K02154 - vvi:100258865 1360.51