Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1113 ATGGAGATGGTAAAGAAAAAACAGAGTCTTTCTTTGTCTTCATCATCATCTTATTCATCCACGGAGATCCTCCTGGTTTTTCTCTACACTTTTTTTCACATCCCCAGAACAAGCTTTTCAACCTCTACTGCTTACGTTCCCAAGGACAATTTCCTCATTGATTGCGGTGCTAATGAATTGGCACACCTCCCTGACGGAAGAATTTTTAAAACTGATGAGCAAAGCAAGATGTTTTTAAATGCTAAAGATGATCTCAAAGTTTCGGCCCCTACCTGGGAACCTAATTTGCCTTCGCCAATTTACTTAACTGCTAGGGTTTTTGTTCAAGAATCTACTTATGCCTTCCATTTGTCGGAACCCGGATGGCATTGGATTCGATTGCATTTCTATCCCATCAAAAGCACTGAATTTGATCTTCTACAAGCAAAGTTTAGTGTCAAAACCGATAGGTATGTTCTTCATTCCTTTAATGTTAACAATGCTTCCAACTACATTCTCAAAGAGTACCTAATAAATATTACGGACCCAAAAGTCTCCATCAAGTTTACTCCAGTGAAGAACAAAGCTGCTTTCATTAACGCTATTGAGGTTGTCTCCGCTCCCAAGAAGTTGATCTCAGACACAAGCACTGAGCTCATTTCCCCCGGAAATCCGTTTCAAGGACTGTCTCGATCTGCTTTCGAGACGGTTCATAGAATTAACATGGGAGGACCTCTTATAACATCACAGAACGACTCTCTCGGAAGGTCTTGGGTGCCTGACAAGCCTTACATTAAATCAGAAGTGTTGGGAAAAAGTGTTCATGCGAAAAGTGTTAAGTACCAACAAGGACAAGAGCAAATAGGGGCATTTATAGCACCACAAAGTGTCTATTCAAGTGCTATTGAAATGGCCGATGCACAAGCAGACCAACCGAACTTCAATGTCACATGGAACTTTGAGGCCGATCCATTATTCAGCTATTTAGTTCGGTTTCATTTTTGTGATATTGTCAGCAAGTCACTTAATTCCTTATATTTCAATGTCTATCTCAACGGAAAAGCGGCTATAACAGATTTGGATTTGTCACACATGTTAGGCGGGTTGGCAATTGCATACTATAAGGATATTGTAGTTAATTCTTCCATGATGTCTAATGGATCACTCATGGTTCAAATCGGTCCTTCAAAACTAGGTACTGGCGATCTTAATGCCATTTTGAATGGGCTAGAGGTTTTGAAAATAAGTAATTCGGTATATAGTTTGGATGGAGAGTTTAGAGAGGATGGAAAGCGTGTGAATAAGTCCCAACGTGTTGTGGTAGCTGCTGTTGGGTTTTCAATGATGTTTGGGGCCTTTGTGGGGCTTGGTGCAATGGTAATAAAGTGGAAAAGAAGGCCTGAAGATTGGCGAAAGAGGAAAAGCTTCTCTTCATGGTTGCTTCCTTCATATTCAGGAGATACGAGTGTTACAGGGGGAAGCAAGACCATGTTCAACTCCTCAACTCTCGGCCTTGGCCGTTACTTCTCCCTGTCCGAGTTACAAGAAGCCACAAAGAACTTCGATTCCTATGCGATAATTGGGGTAGGTGGATTTGGAAATGTTTATATCGGTGAGATAGATGATGGAACTAAAGTAGCTGTTAAGAGAGGGAATCCACAATCCGAACAAGGTATTATGGAGTTCCAAACGGAGATTCAAATGCTTTCAAAGTTAAGGCATAGGCACTTGGTGTCCCTTATTGGGTATTGTGATGAAAACACAGAGATGATATTAGTCTACGAGTACATGTCCAATGGACCTTTAAGAGATCACCTTTACGGCAAGGACTTACCCCCATTGTCATGGAAGAAGAGGTTAGAGATTTGTATTGGAGCGGCTCGTGGGTTGCATTACCTTCACACCGGCACAAATCAAGGTATTATTCATAGAGATGTGAAGACAACAAACATCTTGTTAGATAATAACTTCACAGCCAAGGTAGCTGACTTCGGATTGTCTAAAGATGCACCGATTGGTCAAGGTCATGTTAGCACCGCAGTGAAAGGAAGTTTTGGATATTTAGATCCTGAGTATTTCCGAAGACAACAACTGACAGATAAATCTGATGTGTACTCATTTGGTGTGGTCTTACTTGAAGCACTTTGTGCAAGGCCGGCACTAAACTCGGCATTGCCTAGGGAACAAGTTAACTTAGCTGATTGGGCATTACAATGGAAGAGAAAGGGTCTACTGGAAAAAATCATCGATCCTCTTCTTATCGGTTCGATAAAAAAGGAATCTATGAGAAAGTTTGCAGAGGCAGCTGAGAAATGTCTAGCGGATTACGGGGTGGACCGGCCCACCATGGGAGATGTGTTGTGGCACTTGGAGTATGCTTTGCAACTTCAAGATTCTTTCTCACAGGATAAAACTGGGGAAGAAAATAAACCATCCGATTCTAACACTTCAGATGTCTTCTCTTCTGTGGTAGTGAGTCCTGTCGCTTCCATTTCTAATGACAACCTTAAATCTCGATCAGAAGAGAGCCAAGGCTGTGGCGAAGATCCGGTTATTAATGACCACTCAGGAACAGCGATGTTTTCCCACTTTTCTAATCTTAATGGTCGGTAA 2592 41.74 MEMVKKKQSLSLSSSSSYSSTEILLVFLYTFFHIPRTSFSTSTAYVPKDNFLIDCGANELAHLPDGRIFKTDEQSKMFLNAKDDLKVSAPTWEPNLPSPIYLTARVFVQESTYAFHLSEPGWHWIRLHFYPIKSTEFDLLQAKFSVKTDRYVLHSFNVNNASNYILKEYLINITDPKVSIKFTPVKNKAAFINAIEVVSAPKKLISDTSTELISPGNPFQGLSRSAFETVHRINMGGPLITSQNDSLGRSWVPDKPYIKSEVLGKSVHAKSVKYQQGQEQIGAFIAPQSVYSSAIEMADAQADQPNFNVTWNFEADPLFSYLVRFHFCDIVSKSLNSLYFNVYLNGKAAITDLDLSHMLGGLAIAYYKDIVVNSSMMSNGSLMVQIGPSKLGTGDLNAILNGLEVLKISNSVYSLDGEFREDGKRVNKSQRVVVAAVGFSMMFGAFVGLGAMVIKWKRRPEDWRKRKSFSSWLLPSYSGDTSVTGGSKTMFNSSTLGLGRYFSLSELQEATKNFDSYAIIGVGGFGNVYIGEIDDGTKVAVKRGNPQSEQGIMEFQTEIQMLSKLRHRHLVSLIGYCDENTEMILVYEYMSNGPLRDHLYGKDLPPLSWKKRLEICIGAARGLHYLHTGTNQGIIHRDVKTTNILLDNNFTAKVADFGLSKDAPIGQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPALNSALPREQVNLADWALQWKRKGLLEKIIDPLLIGSIKKESMRKFAEAAEKCLADYGVDRPTMGDVLWHLEYALQLQDSFSQDKTGEENKPSDSNTSDVFSSVVVSPVASISNDNLKSRSEESQGCGEDPVINDHSGTAMFSHFSNLNGR 863
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7929352 7931943 - Conep10aG0114300.1 Cone10ag1113 446911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1113 863 SUPERFAMILY Protein kinase-like (PK-like) 489 785 IPR011009 -
Cone10ag1113 863 ProSiteProfiles Protein kinase domain profile. 514 785 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag1113 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag1113 863 FunFam receptor-like protein kinase FERONIA 479 589 - -
Cone10ag1113 863 Gene3D - 226 409 - -
Cone10ag1113 863 Gene3D - 50 201 - -
Cone10ag1113 863 Pfam Protein tyrosine and serine/threonine kinase 519 709 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag1113 863 SMART serkin_6 514 786 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag1113 863 FunFam Receptor-like protein kinase FERONIA 226 410 - -
Cone10ag1113 863 PANTHER OS07G0166700 PROTEIN 502 790 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cone10ag1113 863 FunFam Putative receptor-like protein kinase 50 201 - -
Cone10ag1113 863 Pfam Malectin-like domain 53 407 IPR024788 -
Cone10ag1113 863 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524(InterPro)
Cone10ag1113 863 Gene3D Transferase(Phosphotransferase) domain 1 590 811 - -
Cone10ag1113 863 FunFam Receptor-like protein kinase FERONIA 590 803 - -
Cone10ag1113 863 MobiDBLite consensus disorder prediction 826 847 - -
Cone10ag1113 863 Gene3D Phosphorylase Kinase; domain 1 484 589 - -
Cone10ag1113 863 CDD STKc_IRAK 520 784 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1113 Cone-Chr10:7929352 Cone19ag0058 Cone-Chr19:370210 7.90E-301 dispersed
Cone10ag1113 Cone-Chr10:7929352 Cone12ag1168 Cone-Chr12:9274822 0 wgd
Cone10ag1113 Cone-Chr10:7929352 Cone6ag1522 Cone-Chr6:12006729 1.29E-16 wgd
Cone10ag1113 Cone-Chr10:7929352 Cone8ag1216 Cone-Chr8:10306930 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81841 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1113 - - - 0.0