Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag1200 | ATGTCCGGCTTCGGATCTACCACTCCCAGTTCACTCTACTCCCACAGGCTCCTCGGACAAGGACTCGAGCTACAAAGACCATCACAAACACAACTAACCGGTAGCAACAAAGACTTCCGAGAAGACGATGAGGAAAATTCGGGTCCCACCGATCCAGCAACAACCAGCACTGGTACTACTTCATCAGACCGTAGGTCCCGAGGCCGTCCTGCAGGCTCGAAGAACAAACCGAAACTGCCGATCATCATAACTCGGGACAACCCAAGTGCCCTAAGATCTCATGTCCTAGAGATATCTTCAAGTTCGGACATAGTTGAAGCCATCACAAACTATGCAAGAAGAAGAGGGAGAGGAGTTTGTATCCTAAGTGGAACTGGATACGTCACCAATGTCACCTTGCGCCAACCAGGGGGCCCATCTGGGAGTGTGATTACATTGCCTGGCCGGTTTGAGATTCTGTCTTTGACTGGGAGCGCTTTGCCGCCTCCTGCTCCACCAGGAGCTGGAGGTCTGAAGATCTACCTGGCAGGGGGGCAAGGACAAGTTGTTGGAGGGAACGTTTCAGGTCAATTGACGGCTTTGGGTTCTGTAGTATTAATGGCTGCATCATTTATGAACGCCGTGTATGATAGGCTTCCGCTTGATGATCAGGATCAGGAGTCACATGTGCCAGTCCAACCAGCAGTGTCTCAAACTTCAGATGTTAGAGGCAGTGGTGGTGGTGGTGGTGGTGGTGATGGCAGCGGCGGCATTAGTGTCAGTGGTGGTGGTGATGGTGGTGTTCCTTTCTACAATTTTGGTGTGAGCATGGGTAGTAGTACTAATACTCATGGTTTTCCTGGACATGATGCGTTTGGTTGGAGTGGTAGCGCATCAAGGCTTCCATTTTAA | 891 | 50.84 | MSGFGSTTPSSLYSHRLLGQGLELQRPSQTQLTGSNKDFREDDEENSGPTDPATTSTGTTSSDRRSRGRPAGSKNKPKLPIIITRDNPSALRSHVLEISSSSDIVEAITNYARRRGRGVCILSGTGYVTNVTLRQPGGPSGSVITLPGRFEILSLTGSALPPPAPPGAGGLKIYLAGGQGQVVGGNVSGQLTALGSVVLMAASFMNAVYDRLPLDDQDQESHVPVQPAVSQTSDVRGSGGGGGGGDGSGGISVSGGGDGGVPFYNFGVSMGSSTNTHGFPGHDAFGWSGSASRLPF | 296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 8859148 | 8860038 | - | Conep10aG0123500.1 | Cone10ag1200 | 446998 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag1200 | 296 | CDD | DUF296 | 92 | 158 | IPR005175 | - | |
Cone10ag1200 | 296 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Cone10ag1200 | 296 | MobiDBLite | consensus disorder prediction | 1 | 81 | - | - | |
Cone10ag1200 | 296 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 88 | 218 | - | - | |
Cone10ag1200 | 296 | MobiDBLite | consensus disorder prediction | 218 | 254 | - | - | |
Cone10ag1200 | 296 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 92 | 205 | IPR005175 | - | |
Cone10ag1200 | 296 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 41 | 288 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
Cone10ag1200 | 296 | Gene3D | - | 91 | 222 | - | - | |
Cone10ag1200 | 296 | ProSiteProfiles | PPC domain profile profile. | 88 | 226 | IPR005175 | - | |
Cone10ag1200 | 296 | MobiDBLite | consensus disorder prediction | 223 | 237 | - | - | |
Cone10ag1200 | 296 | FunFam | AT-hook motif nuclear-localized protein | 91 | 220 | - | - | |
Cone10ag1200 | 296 | MobiDBLite | consensus disorder prediction | 49 | 66 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag1200 | Cone-Chr10:8859148 | Cone11ag0388 | Cone-Chr11:1912189 | 1.46E-70 | dispersed | |
Cone10ag1200 | Cone-Chr10:8859148 | Cone3ag1257 | Cone-Chr3:31399475 | 6.20E-154 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag1200 | - | - | - | 0.0 |