Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1210 ATGAGTGGGGGTGAAACGAGAAGGCTGTGCGAGGAATTTTCGCCTGCTTATTATGGCCTTTGTACTGTGGGAGGAATGCTCAGTGCTGGAACTACCCATCTCGCTATCACCCCTCTTGATGTCCTGAAAGTTAATATGCAGGTAAATCCTATGAAGTATAATAGCATTGTATCAGGCTTTTCTACTCTTTGGAGAGAACAAGGACCTCTATCACTTTGGAGAGGATGGTCCGGAAAATTATTTGGATATGGTATTCAAGGAGGATGCAAATTTGGTCTCTATGAGTACTTTAAGAAGCTTTACACAGATGTATTCAAAGACTACAGCAGAAGCTCCATTTTCTTTCTCAGCAGTGCTTCTGCTCAAGTCTTTGCTGATGTGGCGCTCTGCCCTTTTGAAGCGGTCAAAGTCCGGGTTCAAACGCAGCCTTATTTTGCCAAAGGCTTGGTTGATGGGTTTCCCAAGCTGTATAGAGCAGAGGGAATTTCTGGTTTTTACCGCGGACTTTTACCACTTTGGGGTCGAAATCTTCCATTTTCCATGGCGATGTTCTGTACATTTGAGCATTCAGTGGAGTTTTTATATCAAAATATAATTGAAAGAAGGAAAGAAGATTGCTCAAGGACTCAACAGCTTGGAGTCACATTTTTGGCTGGTTATGCAGCTGGATCTGTTGGAACTTTCATATCTAACCCTGCTGATAATATTGTCTCTTCTCTTTACAATAAAAAAGCCGAAAATATCTCGCAGGCTGTGAGAAAAATTGGGTTTGCAAATCTATTTACGAGAAGTCTTCCAGTTAGAATCGCGCTTGTGGGACCTGTTGTTACATTGCAGTGGTTCTTCTATGATACCATTAAAGTGCTCAGTGGACTGCCTACAAGTGGAGGACTCAAAAGGCGTTTGGAAGAGGCTAATATATCTGCTTAA 930 42.15 MSGGETRRLCEEFSPAYYGLCTVGGMLSAGTTHLAITPLDVLKVNMQVNPMKYNSIVSGFSTLWREQGPLSLWRGWSGKLFGYGIQGGCKFGLYEYFKKLYTDVFKDYSRSSIFFLSSASAQVFADVALCPFEAVKVRVQTQPYFAKGLVDGFPKLYRAEGISGFYRGLLPLWGRNLPFSMAMFCTFEHSVEFLYQNIIERRKEDCSRTQQLGVTFLAGYAAGSVGTFISNPADNIVSSLYNKKAENISQAVRKIGFANLFTRSLPVRIALVGPVVTLQWFFYDTIKVLSGLPTSGGLKRRLEEANISA 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8978939 8981460 - Conep10aG0124500.1 Cone10ag1210 447008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1210 309 SUPERFAMILY Mitochondrial carrier 20 285 IPR023395 -
Cone10ag1210 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 100 IPR018108 -
Cone10ag1210 309 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 8 298 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Cone10ag1210 309 Pfam Mitochondrial carrier protein 21 103 IPR018108 -
Cone10ag1210 309 Pfam Mitochondrial carrier protein 115 196 IPR018108 -
Cone10ag1210 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 289 IPR018108 -
Cone10ag1210 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 193 IPR018108 -
Cone10ag1210 309 Gene3D Mitochondrial carrier domain 21 290 IPR023395 -
Cone10ag1210 309 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 19 290 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1210 Cone-Chr10:8978939 Cone18ag1459 Cone-Chr18:9772843 8.03E-113 dispersed
Cone10ag1210 Cone-Chr10:8978939 Cone11ag0021 Cone-Chr11:128661 5.85E-113 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1210 K15102 - mdm:103440922 523.857