Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1249 ATGAATACAAAATCAAGCTTAGGTGCTCTGTTTTTGACTGGTGCTCTGTTTTTCACACTCTGTTTTTCATCCTCTGCTCAAACCTGCCAAACCCACACTCTATCCACCTCAAACGCCTACGCCACCTGCGTAGATCTTCCCGTCCTAGACTCATTTCTCCATTGGACATACGATCAAGCTTCCGGTTCACTCAAGATCGCGTTTAGACGTCCTCAAACCACAGAAAACACATGGATTTCATGGGCCATAAACCCAGAAGGCCAGAAAATGATTGGGTCTCAAGCCCTTGTAGCATACAAGAATTCATCTGGGGTGAGGGCTTTTACTTCTCCGATCACGGGTTATAGTTTGCCGGAGGGGACTTTAAGTTTCGGGGTGACAAATTTGACGGCGAATTATGATACTAGTAATAGTGAGATGACGATAATGGCTATTCTGCAACTCGGTAGTGGGTCTAGTGTGACCCAAATATGGCAGGAAGGTCCTTTGAGTGGCGGTGTTCCTGCTTCTCATGTTACTAGTGGTGATAATGTTAGATCGATGGGTACTTTGGATTTGCTTTCTGGTCAAGCTGTTGCTGGTGGAGGTGGTTCTAGTTCGAGGGCTAGAAGGAGGAATATTCATGGAGTGCTAAATGCAGTAAGTTGGGGAACCTTATTGCCTATAGGAGCCATGCTTGCTAGGTATTTGAAAGTATTCAAAGCAGCAGATCCAGCATGGTTTTACCTTCACATAGCCTGCCAGTCCTCTGCTTATATTATTGGTGTTGCTGGTTGGGGCACTGGTCTTAAGCTCGGTAGTGATTCTCCTGGTATTCAACATGATTCTCATAGGAACATTGGCATCACACTCTTCGCCCTTGGCACGCTTCAGGTCTTTGCTCTACTTTTGAGGCCGAATAAGGATCATAAATACAGATTCTATTGGAACATATACCACCACACAATCGGATACACAGTTATCATCCTCAGCATTGTCAACATCTTCAAGGGTTTCGACATTTTGGATCCTGAAAAGAAGTGGAAGAAAATTTATATCGGAATTATCATCTTCTTGGGCATCGTTGCTCTTATTTTGGAAGCTGTCACTTGGTTCATAGTTATAAAGAGAAAGAAGACCAACTCCAACAAGCTCTCTCACTCCTCTAATGGTGCTAATGGAGTTCAGAGCTATGCTGCCTGA 1182 44.25 MNTKSSLGALFLTGALFFTLCFSSSAQTCQTHTLSTSNAYATCVDLPVLDSFLHWTYDQASGSLKIAFRRPQTTENTWISWAINPEGQKMIGSQALVAYKNSSGVRAFTSPITGYSLPEGTLSFGVTNLTANYDTSNSEMTIMAILQLGSGSSVTQIWQEGPLSGGVPASHVTSGDNVRSMGTLDLLSGQAVAGGGGSSSRARRRNIHGVLNAVSWGTLLPIGAMLARYLKVFKAADPAWFYLHIACQSSAYIIGVAGWGTGLKLGSDSPGIQHDSHRNIGITLFALGTLQVFALLLRPNKDHKYRFYWNIYHHTIGYTVIILSIVNIFKGFDILDPEKKWKKIYIGIIIFLGIVALILEAVTWFIVIKRKKTNSNKLSHSSNGANGVQSYAA 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9487226 9490343 + Conep10aG0128400.1 Cone10ag1249 447047

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1249 393 PIRSF UCP037471 3 392 IPR017214 -
Cone10ag1249 393 SMART 561_7 207 332 IPR006593 -
Cone10ag1249 393 ProSiteProfiles DOMON domain profile. 49 161 IPR005018 -
Cone10ag1249 393 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 11 373 - -
Cone10ag1249 393 FunFam Cytochrome b561 and DOMON domain-containing protein 187 376 - -
Cone10ag1249 393 ProSiteProfiles Cytochrome b561 domain profile. 172 368 IPR006593 -
Cone10ag1249 393 CDD Cyt_b561_FRRS1_like 180 361 - -
Cone10ag1249 393 Gene3D - 186 379 - -
Cone10ag1249 393 Pfam Protein of unknown function (DUF568) 90 186 IPR045265 -
Cone10ag1249 393 CDD DOMON_CIL1_like 40 188 IPR045265 -
Cone10ag1249 393 Pfam Eukaryotic cytochrome b561 208 332 IPR006593 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1249 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1249 Cone-Chr10:9487226 Cone7ag0917 Cone-Chr7:7202922 1.57E-120 dispersed
Cone6ag1172 Cone-Chr6:8979298 Cone10ag1249 Cone-Chr10:9487226 1.28E-28 transposed
Cone10ag1249 Cone-Chr10:9487226 Cone3ag1297 Cone-Chr3:31855461 1.18E-242 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1067 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1297 Cone10ag1249 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002015 1 3 0 1 0 2 0 2 2 2 2 2 5 2 2 4 2 2 4 2 2 4 0 2 2 2 2 5 5 2 66