Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1274 ATGATGGCTATAACAATGAGCATTTCACCTGGAGTGCCATCACCATTATCATCGTCACAGACGTTATCTTCACCGGCAGTAAGCTTGCCGCTCTCTACTATCCCTGGTGGTTATGGGTGGCCTCTTCTAGGACCCTTATCAGACCGATTGGATTACTTCTGGTTCAAAGGCCCCGAAACATTTTTCAAGCAGAGAATTGACAAGTACAAGAGCACGGTTTTCCGAACCAATATCCCACCAACCTTTCCCTTCTTCCTCAAAGTAAACCCGAACGTCGTCGCCGTACTAGATTGCAAGTCATTTGCGCATCTTTTCGACATGGATATCGTCGAAAAAAGGAACGTCCTCGTCGGAGACTTCATGCCTAGCGTTAGCTTCACAGGGGATACTAGGGTTTGTGCTTATCTTGATACTTCTGAGCCTCAACATTCTAAGATCAAGAACTTCGCTATGGACATTCTAAAACGAAGCTCGAAGATTTGGGCCCGAGAAGTAACCACCAACCTTGACACAATGTGGGATGCAATCGAATCCGATGTGTCTAAATCCGGTAAGGCCTCATATATAATCCCACTGCAAAAATTCATCTTCGAGTTTCTTTGCAAATGCTTGGTCGGAGCCGACCCCTCGAGGTCGCCAGAAGTTGCTGAATCTGGCTACGCAATGCTTGACCGTTGGCTCGCACTTCAGCTCCTTCCCACCGTAAAGATTGGAGTCCTTCAGCCACTTGAAGAAATTTTTCTTCACTCTTTTGCATACCCTTATGGATTGGTTAGTGGAGATTACAACAGATTATCTGCGTTCATCGAAAAAGAAGGGAAAGATGTATTACAAAGAGGACAAACGGAGTTCGGATTGAGTCGGGAAGAAACGATTCACAACCTTTTCTTCATACTAGGTTTCAATGCATTTGGTGGGTTCTCTGTTTTCCTGCCAGTTCTACTCAGCACTATAGCGCGTGACAAAACTGGTCTACAACAAAAGCTACTAAAAGAAGTAAGAGAAAAAGCCGGTTCAACTCTGAATTTTGACTCCATAAAGCAAATGGAACTTGTTAACTCGGTTGTGTACGAGACACTCCGGCTCAACCCGCCAGTCCCGCTCCAGTATGCCCGAGCCAGGAAAGATTTCCAACTGAGTTCATATGACTCGGCCTTTGACATAAAAAAGGGGGAGTTGCTATGTGGGTATCAACCCCTGGTGATGAAGGATCCAAGGGTTTTTGATGAACCGGAGACATTCAAAGCGGACCGATTCATGGAAGAGAAAGGAGCCGAATTGTTGAACTACTTGTACTGGTCGAATGGGCCGCAGACCGGTTCGCCGACCGAGTCAAATAAACAATGTGCTGGTAAAGATTACGTCGTCATGACAGCATCTTTGTTTGTGGCCCACTTGTTTCAGAGATATGATTCGGTGACAGGTGATTCGTCATCAATCACAACATTTGAAAAGAATTCAAAAAAATTCTAG 1473 45.21 MMAITMSISPGVPSPLSSSQTLSSPAVSLPLSTIPGGYGWPLLGPLSDRLDYFWFKGPETFFKQRIDKYKSTVFRTNIPPTFPFFLKVNPNVVAVLDCKSFAHLFDMDIVEKRNVLVGDFMPSVSFTGDTRVCAYLDTSEPQHSKIKNFAMDILKRSSKIWAREVTTNLDTMWDAIESDVSKSGKASYIIPLQKFIFEFLCKCLVGADPSRSPEVAESGYAMLDRWLALQLLPTVKIGVLQPLEEIFLHSFAYPYGLVSGDYNRLSAFIEKEGKDVLQRGQTEFGLSREETIHNLFFILGFNAFGGFSVFLPVLLSTIARDKTGLQQKLLKEVREKAGSTLNFDSIKQMELVNSVVYETLRLNPPVPLQYARARKDFQLSSYDSAFDIKKGELLCGYQPLVMKDPRVFDEPETFKADRFMEEKGAELLNYLYWSNGPQTGSPTESNKQCAGKDYVVMTASLFVAHLFQRYDSVTGDSSSITTFEKNSKKF 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9785795 9789748 + Conep10aG0130900.1 Cone10ag1274 447072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1274 490 Pfam Cytochrome P450 314 474 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone10ag1274 490 PRINTS E-class P450 group IV signature 349 365 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone10ag1274 490 PRINTS E-class P450 group IV signature 402 420 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone10ag1274 490 PRINTS E-class P450 group IV signature 386 400 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone10ag1274 490 PRINTS E-class P450 group IV signature 449 467 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone10ag1274 490 SUPERFAMILY Cytochrome P450 29 474 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone10ag1274 490 Gene3D Cytochrome P450 29 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone10ag1274 490 CDD CYP74 63 482 - -
Cone10ag1274 490 PANTHER CYTOCHROME P450 26 34 470 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cone10ag1274 490 FunFam Allene oxide synthase, chloroplastic 29 488 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1274 Cone-Chr10:9785795 Cone7ag1789 Cone-Chr7:11734720 7.49E-132 dispersed
Cone10ag1274 Cone-Chr10:9785795 Cone3ag1324 Cone-Chr3:32186773 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1274 K10528 - mdm:103427164 743.421