Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag1283 | ATGAATAATTTTAAAGCACAGCCTTCTGCCAGGCTTCTTGGAACCTTATCCATGGAGTTCTTCTTTAGAATGGTTGTTGTACTGGTCATTTGCTTGTGTACGCCAGTAGGCACAATGGGGGCAACTGGAAATGCGAGCAGTAGTACTGGTTTATCTAAGCCTAGTGTGGTAAATATCGGGGCTCTGTATACTTTTGATTCGGTTATTGGAAGGTCAGCGAAACTGGCTATTTTAGCCGCCATTGATGATGTCAATGCTAATGCAAGCATTCTTCCTCAGACTAAACTGAATGTCATCTTGCATGATACAAATTGCAGCGGGTTTCTTGGAACGGTAGAAGGTTTGCAGCTAGTAGAAGACGAAGTGGTAGCTGCAATCGGGCCACAATCATCAGGAATAGCCCATATCATATCCCATGTTGTTACGGAACTCCATATCCCTCTCCTCTCCTTCGCCACGGATCCCACTCTTGCAGCACTTCAATACCCGTATTTCCTCCGAACAACACAGAGCGACTATTTTCAAATGAATGCAATAACCGATCTAGTTGCATATTATGGTTGGAGGGAAGTCATAGCCATCTTTGTAGATGATGATTATGGAAGAAACGGGATATCAGCATTAGGCGATGCGTTGGCAAAAAAACGCGCGAAAATCTCTTACAAAGCCGCTTTAACTCCCGGAGCTTCTAGAAGCAGAATCAACGACTTGTTGGTCGAAGTCAATCTTATGGAATCTCGGGTTTATGTTGTACATGTCAATCCTGACTCAGGTTTGACTATATTCTCTGTCGCCAAGGCTCTCGAGATGATGGGTAATGGTTATGTTTGGATTGCAACCGATTGGCTTCCTTCTTTTCTTGATTCTTTAGATACGACAAATTCGGATATAATGAATTCGATCCAAGGGGTTGTCACTCTTCGTCATTATACTCGGGATAGCAACCTCAAGAAAAATTTCGGGTTGAAATGGAAGGGATTAAAATATAATAGGAGTATGAACTTCAATTCTTATGCACTCTACGCTTATGACTCCGTATGGTTAGTGGCCCATGCTCTCGACCTTTTCTTCAAGGAAGGCGGGAACATCTCTTTCTCGAATGACCCGAAACTACACGATGCGAACAGAAGCATGCTTCATTTGACGTCGCTCCGTATTTTCGACCGTGGGCCCCAACTTCTCCAGACGATTTTGAGGATGAACTTCCTGGGTTTAAGCGGCCGGATTGCGTTTGATTCAGAGAAAAATTTAGTAAATCCGGCTTATGATGTTTTGAACGTTGGTGGGACAGGTATGCTTAGAATCGGTTATTGGTCAAATTATTCTGGTCTTTCTAAGGTTACTCCAGAGATTCTATACACAAAGCCTCCTAATACTTCTTCTAGTAATCAAAATCTTTATAGTGTCATATGGCCAGGAGAAACCACAACAATTCCTAGGGGATGGGTTTTTCCAAACAATGGAAAGCCATTAAGGATTGGGGTCCCGAACCGAGTTAGTTACAAAGAATATGTTTCTAAAGACAAGAACCCACCTGGGGTTAGAGGGTTTTGTATTGATGTGTTTGAAGCTGCCTTGAGTCTATTGCCTTATGCTGTCCCACACACGTATATATTATATGGAAATGGAAAGGACAATCCCGAGTATAGCAATCTTGTTTATGCTGTTTCACAAAATAGGTTTGATGCAGCTGTTGGGGATGTAACGATTACTACAAATCGGACAAAGACTGTGGATTTCACACAACCTTACGTCGAATCGGGTCTTGTTGTAGTAGTTGCAGTCAAAGAGCAGAAGTCAAGCCCATGGACTTTTCTCCGGCCCTTTACTATTCAGATGTGGTGTGTCACAAGTGTCTTCTTTCTTTTCGTCGGAGCGGTTGTTTGGATTCTCGAGCACCGGACTAATTCAGAGTTCCGTGGCCCACCTAGGCAACAACTCATAACAATATTCTGGTTTAGTCTCTCTACAATGTTTTTCTCCCACAGAGAGAATACAGTCAGCACTCTAGGGCGACTGGTTCTGATTATATGGCTATTTGTAGTGTTGATTATCAATTCAAGCTATACGGCTAGTTTGACTTCGATCCTGACCGTTCAACGGCTCGAGTCAAAGATTGAAGGGATCGAGAGCTTGATTTCGAGCTCTGAACCGATTGGAGTTCAAGTAGGATCATTTGCATTTAAGTATTTGATTAATGAGCTCAATATAGCGGAATCAAGGATTGTAAAATTGAAAGGGCAAGAAGAGTATGAGAGTGCTCTTTTGCGTGGGCCCACAGGCGGGGGTGTAGCGGCCATTGTCGATGAACTTCCTTACATTGAGCTCTTCTTGTTGTATACAAAATGCAAGTTCAGGACTGTTGGACAAGAGTTCACAAAAAGTGGATGGGGATTTGCATTCCAAAGGGACTCACCTCTAGCAGTTGATCTATCCACCGCCATTCTCCAACTTTCAGAAAATGGCGACCTCCAAAAGATCCATGATAAATGGCTGTCAAAATCCGATTGCAATTCACAAGTCAACCAGGTGGACGACAACCGCTTATCTATCAGCAGCTTCTGGGGACTTTTTCTTATTTGCGGTATCGTCTGCATCCTTGCTCTTGCTGTGTTCTTCCTTAGAGTGCTCTTTCAATATTTGAAATTCGTATCGGAGTTTGAAAGGGATGTTGAGGAGATCGAGCCGGAAAGTTCTAGGCGCACAAGCCAGGGAACGAGCTTTAAAAGCTTTACGGATTTCGTCGATAAGAGAGAGATTGAGGTTAAGCAGCAGAGACTTAAGAGAAAGGCTAGTCAAGATGGGAAACAAGGGGCTAGCTTAAGCTCGGACGTGCAGTCCAATTCATCGTTTTAA | 2856 | 43.24 | MNNFKAQPSARLLGTLSMEFFFRMVVVLVICLCTPVGTMGATGNASSSTGLSKPSVVNIGALYTFDSVIGRSAKLAILAAIDDVNANASILPQTKLNVILHDTNCSGFLGTVEGLQLVEDEVVAAIGPQSSGIAHIISHVVTELHIPLLSFATDPTLAALQYPYFLRTTQSDYFQMNAITDLVAYYGWREVIAIFVDDDYGRNGISALGDALAKKRAKISYKAALTPGASRSRINDLLVEVNLMESRVYVVHVNPDSGLTIFSVAKALEMMGNGYVWIATDWLPSFLDSLDTTNSDIMNSIQGVVTLRHYTRDSNLKKNFGLKWKGLKYNRSMNFNSYALYAYDSVWLVAHALDLFFKEGGNISFSNDPKLHDANRSMLHLTSLRIFDRGPQLLQTILRMNFLGLSGRIAFDSEKNLVNPAYDVLNVGGTGMLRIGYWSNYSGLSKVTPEILYTKPPNTSSSNQNLYSVIWPGETTTIPRGWVFPNNGKPLRIGVPNRVSYKEYVSKDKNPPGVRGFCIDVFEAALSLLPYAVPHTYILYGNGKDNPEYSNLVYAVSQNRFDAAVGDVTITTNRTKTVDFTQPYVESGLVVVVAVKEQKSSPWTFLRPFTIQMWCVTSVFFLFVGAVVWILEHRTNSEFRGPPRQQLITIFWFSLSTMFFSHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQRLESKIEGIESLISSSEPIGVQVGSFAFKYLINELNIAESRIVKLKGQEEYESALLRGPTGGGVAAIVDELPYIELFLLYTKCKFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHDKWLSKSDCNSQVNQVDDNRLSISSFWGLFLICGIVCILALAVFFLRVLFQYLKFVSEFERDVEEIEPESSRRTSQGTSFKSFTDFVDKREIEVKQQRLKRKASQDGKQGASLSSDVQSNSSF | 951 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 9895168 | 9900391 | + | Conep10aG0131900.1 | Cone10ag1283 | 447081 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag1283 | 951 | CDD | PBP1_GABAb_receptor_plant | 58 | 447 | IPR044440 | - | |
Cone10ag1283 | 951 | SUPERFAMILY | Periplasmic binding protein-like II | 467 | 834 | - | - | |
Cone10ag1283 | 951 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 57 | 904 | IPR015683 | GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER) | |
Cone10ag1283 | 951 | Gene3D | - | 486 | 600 | - | - | |
Cone10ag1283 | 951 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 548 | 610 | IPR001638 | - | |
Cone10ag1283 | 951 | FunFam | Glutamate receptor | 728 | 836 | - | - | |
Cone10ag1283 | 951 | SUPERFAMILY | Periplasmic binding protein-like I | 52 | 483 | IPR028082 | - | |
Cone10ag1283 | 951 | SMART | GluR_14 | 492 | 834 | IPR001320 | GO:0015276(InterPro)|GO:0016020(InterPro) | |
Cone10ag1283 | 951 | FunFam | Glutamate receptor | 602 | 732 | - | - | |
Cone10ag1283 | 951 | MobiDBLite | consensus disorder prediction | 925 | 951 | - | - | |
Cone10ag1283 | 951 | Gene3D | - | 171 | 444 | - | - | |
Cone10ag1283 | 951 | FunFam | Glutamate receptor | 486 | 602 | - | - | |
Cone10ag1283 | 951 | CDD | GluR_Plant | 489 | 832 | - | - | |
Cone10ag1283 | 951 | Gene3D | - | 601 | 741 | - | - | |
Cone10ag1283 | 951 | FunFam | Glutamate receptor | 171 | 326 | - | - | |
Cone10ag1283 | 951 | Gene3D | - | 75 | 419 | - | - | |
Cone10ag1283 | 951 | PIRSF | IGluLR_plant | 17 | 950 | IPR017103 | - | |
Cone10ag1283 | 951 | Pfam | Ligand-gated ion channel | 834 | 864 | IPR001320 | GO:0015276(InterPro)|GO:0016020(InterPro) | |
Cone10ag1283 | 951 | Pfam | Receptor family ligand binding region | 74 | 429 | IPR001828 | - | |
Cone10ag1283 | 951 | Gene3D | - | 780 | 839 | - | - | |
Cone10ag1283 | 951 | MobiDBLite | consensus disorder prediction | 935 | 951 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag1283 | Cone-Chr10:9895168 | Cone3ag1340 | Cone-Chr3:32383157 | 0 | dispersed | |
Cone10ag1283 | Cone-Chr10:9895168 | Cone3ag1339 | Cone-Chr3:32373385 | 1.97e-310 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag1283 | K05387 | - | rcu:8274830 | 1332.01 |