Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1297 ATGAAAAGGAATTCTATTCAGCGACGGTATTTTGATTTTGTCGGGAGAAATGGAATTTTATTTTTGTGCCGAAAGGAAGAAATGGAATTGAAGAAAGCAAATTACGCGGTTTTCTTGGGGATTCTGCTTGTTGCGGCGGCGTTTGCAGGTTCTAACGGCTTTAGGAGAAGAGCGTCAAAATCGTTCGACAATGGTAGCAAAAGCAGCGGCCATTTCTCGCCGCGGTTAATTGAAGGTGGGAAGGCAGAGCAGCCATGGATTCGTAGCAGGAAAGAATTGATAGACAAGGAGGAGGGTGGTACTGTCCCCTATAAATCATCAAAGGAGATGAGGATCATGTTCCATGTCTCGAAACAAGAAAGTAGCTCTACTGGTTGGCTCGTCAAATCCGCCCGGTTCATTCTCAGCTCACCATATACTTCTAGAAGACTCCTTGAGAGTGAAACAGAAGGGGGCCAACCGACTCCTACAACCTCGGATTCGACACCGTCTCCAGAGCATAATCCATCTCCATCCCCGGGCGATTCTTCTCACGTACATTCACTGAAGGTCGGTTCTTCGGTGCGCCCGCCACCATACCATGATGACCCTCCAAGCTCGTCATCGGAAAACAACACTCCTGCCCCATCACCGAGCAATACGAATGCCCCAAGCCCAGATCATCAGATCCACAAAAGCCCGCCCCCTAGCGACAATGTCCTGGAGCCTTCTCTCACACCATCACCAGCTCGGTCTCCTCCTCCAAAGCTTCTTCCGCCTGCCGTTAAATCTCGGGGTCAGTCACAATTACAAAATTTGACGAGTTTGGGTCCTCCACCTCCAAATGCGGACTCACCTCTCGCTGATACTGATCCAACCGAGTCTACAACACAGAATAGTAATGAACAGAGAATCATTATTGCCTCCGCTTCTGCAGTAGGAATACTTCTTGCCCTTACACTTTTGTTAGTTTTCTTCATCAGGCGTAGGAGGAACAATAACGACTCGAAAGACGAACGACCTCTTCTCAACTTAACCTCGAATTCAAGTAATGATCAAGGTTTAGATTCGTCGATGAAGCTGGATAATGAGTCATCTCTCGGATCATTACCACCTCTTAAACCTCCTCCGGGTAGAAAAGTACCTGAGGCTGAGGCACCACCACCACCTCCGGTTCCTTCTCCGTCACCACCTCCACCGCCTGCTCCTAAACCCCCGCCACCTCCAGCTCCAAAAGCTGCTCGGTTTCCACCTCTTCCACCACGAGGAATACCCGGAAAAGCTCAAACCCCGCCTTTAGCTCCATACCATAGTGGACAGATTGGTTCCGGTGAAGGGGATGGTAACGCTGATGGGGATGCCGGATCTCAAAAGGCCAAGTTGAAGCCCTTTTTCTGGGACAAGACGGCTGCTAAGCCCGATCAATCCATGGTCTGGCACGAGGTTAATGCTGGATCATTCCAGTTTAATGAGGAGCTGATGGAGTCTCTGTTCGGTTATACTGCTGTTGATAACAAAACCGGGCTACGGAAAGGGTCCTCGCCTTTAGAACCTGGGACTCAGTACGTTCAAATCCTTGATCCTCGGAAAGCACAGAATCTCGCGATTCTTCTAAAATCCCTGAATGTGAAAACGGATGAAGTTGTTGATGCCCTTCAAGAAGGTAATGAGCTTCCTGTGGAGCTACTCCAAACTCTTATGAAGATGACACCAACACAAGACGAGGAACTGAGGCTTAGATTGTATACGGGCGAGATTTCGGAACTTGGTCCCGCAGAACGTTTCCTCAAAGTGTTGGTTGATATCCCATTCGCTTTTAAACGGCTAGAGTCGCTCCATTTCATGTTTTCCTTCAAAGAGGAGGTTTCCGGCCTCCGAGATTCCTTTGCAACTCTTGAGGTTGCTTGCAACAAACTAAGACACAGCCGGCTATTCCTAAAGCTTCTAGAAGCAGTTCTCAAAACCGGAAACCGAATGAACGACGGGACCAACCGTGGGGCTGCCCAAGCATTCAAGCTCGACACCCTATTGAAATTATCAGATGTCAAAGGAGTTGACGGGAAAACAACACTCTTACACTTCGTCGTTCAAGAGATCGTCCGTTCAGAAGGCAAAAAAGCAGTGCGGGCAGCTCGGGAAAGCGAGAGCTTCTCGAGTACAACCTCATCGGATCTTTCGGAGGATTTGTACAATGAATCTTCCAAACATTATAGCCAACTTGGTCTTGAAGTCGTGTCCGGTTTAAGCACTGAACTCGAAGATGTCAAAAAGGCAGCATCTATTGAGGGTACCGAGTTAACGACTAGTATTTCAAAATTAGGCCAATCTAAAATTAAGACCCGAGATTTCTTGAATAATGAAATGAAGGGTTTGGAGGAGAGTAGGGGGTTTTATAATTCATTGGCTCGGTTTGTAGAATCCTCGGAAGGTGAGGTTGTTTCGATTTTGGAAGAAGAGAAGAAGATAATGCCTATGGTGAAGAGCACGGCGGATTATTTCCATGGGAAGGCGGGAATGGATGAAGGGTTGAGATTGTTTGTGATTGTAAGGGATTTCTTGATCATACTAGATAAGACATGCAAAGAGGTTTCAGAGGCAGCTAAGAAGGCAGAGAGAAATTCAAAGAGAGAGAGTAGCACTTCAAAACATTCGAGTTCTTCAGAGAATGCAGAGCCACCGTTCGATATTCGCCAGCGGTTGTTTCCCGCCATTGTTGGACGGCGAATAGATGATTCTGATTCTGATGATGAGACCTGA 2736 47.48 MKRNSIQRRYFDFVGRNGILFLCRKEEMELKKANYAVFLGILLVAAAFAGSNGFRRRASKSFDNGSKSSGHFSPRLIEGGKAEQPWIRSRKELIDKEEGGTVPYKSSKEMRIMFHVSKQESSSTGWLVKSARFILSSPYTSRRLLESETEGGQPTPTTSDSTPSPEHNPSPSPGDSSHVHSLKVGSSVRPPPYHDDPPSSSSENNTPAPSPSNTNAPSPDHQIHKSPPPSDNVLEPSLTPSPARSPPPKLLPPAVKSRGQSQLQNLTSLGPPPPNADSPLADTDPTESTTQNSNEQRIIIASASAVGILLALTLLLVFFIRRRRNNNDSKDERPLLNLTSNSSNDQGLDSSMKLDNESSLGSLPPLKPPPGRKVPEAEAPPPPPVPSPSPPPPPAPKPPPPPAPKAARFPPLPPRGIPGKAQTPPLAPYHSGQIGSGEGDGNADGDAGSQKAKLKPFFWDKTAAKPDQSMVWHEVNAGSFQFNEELMESLFGYTAVDNKTGLRKGSSPLEPGTQYVQILDPRKAQNLAILLKSLNVKTDEVVDALQEGNELPVELLQTLMKMTPTQDEELRLRLYTGEISELGPAERFLKVLVDIPFAFKRLESLHFMFSFKEEVSGLRDSFATLEVACNKLRHSRLFLKLLEAVLKTGNRMNDGTNRGAAQAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIVRSEGKKAVRAARESESFSSTTSSDLSEDLYNESSKHYSQLGLEVVSGLSTELEDVKKAASIEGTELTTSISKLGQSKIKTRDFLNNEMKGLEESRGFYNSLARFVESSEGEVVSILEEEKKIMPMVKSTADYFHGKAGMDEGLRLFVIVRDFLIILDKTCKEVSEAAKKAERNSKRESSTSKHSSSSENAEPPFDIRQRLFPAIVGRRIDDSDSDDET 911
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10119840 10124367 + Conep10aG0133700.1 Cone10ag1297 447095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1297 911 MobiDBLite consensus disorder prediction 860 911 - -
Cone10ag1297 911 Pfam Formin Homology 2 Domain 449 848 IPR015425 -
Cone10ag1297 911 SUPERFAMILY Formin homology 2 domain (FH2 domain) 390 868 - -
Cone10ag1297 911 SMART it6_source 444 864 IPR015425 -
Cone10ag1297 911 MobiDBLite consensus disorder prediction 332 358 - -
Cone10ag1297 911 MobiDBLite consensus disorder prediction 257 271 - -
Cone10ag1297 911 Gene3D Formin, FH2 domain 450 884 IPR042201 -
Cone10ag1297 911 MobiDBLite consensus disorder prediction 860 875 - -
Cone10ag1297 911 MobiDBLite consensus disorder prediction 363 421 - -
Cone10ag1297 911 PANTHER FORMIN-RELATED 273 910 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cone10ag1297 911 MobiDBLite consensus disorder prediction 198 221 - -
Cone10ag1297 911 MobiDBLite consensus disorder prediction 144 294 - -
Cone10ag1297 911 MobiDBLite consensus disorder prediction 327 450 - -
Cone10ag1297 911 ProSiteProfiles Formin homology-2 (FH2) domain profile. 444 875 IPR015425 -
Cone10ag1297 911 MobiDBLite consensus disorder prediction 144 183 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1297 Cone-Chr10:10119840 Cone6ag0090 Cone-Chr6:438757 1.16E-178 dispersed
Cone10ag1297 Cone-Chr10:10119840 Cone12ag1403 Cone-Chr12:10298466 9.96E-182 wgd
Cone10ag1297 Cone-Chr10:10119840 Cone9ag0106 Cone-Chr9:462691 1.43E-181 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1297 K28090 - csv:101206094 645.195