Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1305 ATGGAAGCTACCTTCTCTACAGTAAGATGGTTTCTATCCTCCATTTTTACAACCATATTCATTTTTTCCTGTCTGTTCTTTTTAGTTTCGGTTTCCGCTGCGAGAGATACGATGACATTCAGCACTCCCGTTAGAGATGATAAGCAAAGCAACCTTGTTTCTGCTGGAGAAACTTTTGAGCTTGGTTTCTTCACTCCCAATGGAAGCTCAGATGATAAAAGAAGATATGTAGGGATATGGTATTACGACAGAACGGAACCACCAACGGTTGTCTGGGTAGCAAATCGGGACAGAGAAATACCCAATAGAAATGGAGTTTTGAAGATTGCAGAAGACGGGAATCTCAAGGTTATGGTTAGAGATGAGCCTTATTGGACAGCAGACATCCAACGTCCTCTAAACGGAATTGTACTGAAGCTCATGGATAATGGGAACCTGATTCTAATTAAAGAAGGAGATCAAGATAAGGACATAAATTGCAGTATATGGCAAAGCTTTAATTTTCCAACAGATACATTTCTTCCTGGTATGAAAATGGTTGAAGGATTGAAATTGACTTCATGGATAAGAAGTGACGACCCAGCACCAGGAAAATTCACCTTCGAGATAGATGGAGGAGACCAAAACCAATACATCATCAATGACGGAATCGACCCGCACTGGAAAAGCAATATATGGGGGACTGAAAGTGTGGGGATTCCTTTTTCTGTTCTAGACTATTTATCAAACTTCACTTATTTAAACAATTCAAGGAAAATGTTTAATAACTTTAGCCCGCAGATACAATTCAACAATCCAAAGACAGTGATAAACAATTCAAGGATAGTGATGAACTATGACGGGCAGATACAATTCCTTTCCTTTGACATCAAAACCAACTCATGGTCTAAGAGATGGTATCAACCAAAGGGAAAATGCGACTTGGCTAATTCTTGTGGACAATTTGCTAGCTGCAACAGTGAAAATAGGTTTAATTGCAAGTGCTTGCCTGGGTTTATACCTAAGTCACGGGAAAATTGGAACAAGGGAGACTTTCAAGATGGATGCACCAGAAAATCTGAATTAACATGTAGAAACGATAGTGATAACTTCTTGGTGTTAAGAATGATGGAAATGAGAAAGCCACATTTAACGTGGCCAGGTAAAGGCGAGGCTTGCAAGAAGACTTGCCTTGAGAAAAAATGCAAGTGTCTGGCTTATTCAGAGAGTGGACCAGAAAGCAGGGACAGTGAGTGCAGGATTTGGGAAGAGGATGATGAAATTAAAAATATTAGGGAATCTTTGAAAGGAACCATTTATGTCCGCGTTCCGCTTTCTGATACAGAATTGACAAGTAAAGACTGCCCTGCTTGTGGAACCGATGCTATTCCCTATCCTCTAAGCAACGGAGATTGTGGTGACCCCAAGTACCAAAGCTTTTTTTGCAACACAACGAGTGCCCAACTCTACTTTCAAACAGATGATGATACTTTCTACCGAGTCACAATCATCGTTCCGGATAACCGTACTTTTTCTATAAAAGTAAATAAATCAGAATGTGATGACAAAGACAAAATGGGAAAGTTTTTGCAGGTGAACCAATCCTCTCCATTTTTTGTGAGCAAGGTTTGCACGGGTGGTTGGTCTGAAGTAGAAATTGGGTGGATGCCCCCATTGGAACCCATTTGTACTTCATCCGACGACTGCAAGTATTGGTCAAATTCAATCTGCACTGTGACAAAAGATGGAACGAAAAGGTGCCTTTGTGAATCTTCCTTTCAATGGAATGGAACAAACATCAATTGTACTCGAGGAGTCAGTAATTTCCATAAAGGAAATGAAGGGGACACACTACGTATCATAGTTCCAGTGGCTGTTGCTACCTTAGTTGTTATCTTCTGTTTTACATTTTTCATGTTTTACTTGAGAAGAATGAACGTGGCTGATACACAAGACCAGAGACGGAATGTTTGGGAAAACCAGGCATTTCGCTTGTATGATAATGAGAAACGCGTCAAAGACTTCATCAACTCACGCCAGTTCGGAGAAGATGATAAGAAACAAATCGATGTTCCCTTTTTTGATCTGGACGTTGTACTAGCCGCCACAGACAATTTCTCAGAAGCAAACAAACTTGGACAAGGAGGATTTGGACCTGTTTACAAAGGTACGTTTCCAGGAGGACAAGAAATTGCTATAAAGATGTTGTCCAGAGGTTCAGGGCAAGGATTAGAGGAATTTAAGAATGAGGTCATGTTGATTGCTAAGCTGCAGCATCGAAATCTTGTTAGGCTTTTGGGTTATTGCGTCGAAGGAGAGGAAAAGATGTTACTCTATGAATATATGCCCAACAAAAGCTTAGACTCCTTTATATTTGATCGAACACTCTGTTTGTTACTCAATTGGGAGATACGGTTTAATATTATTTTGGGAATTGCTCGAGGTCTGCTTTATCTTCACCAAGACTCTAGGCTGAGGATCATTCACAGAGACTTGAAAACAAGTAACGTTTTACTAGATGAAGAGATGAACCCGAAAATTTCAGATTTCGGGTTGGCAAGGATTCTTGGAGGTAAAGAAACTGAGGCAAGCACAGTTCGAGTTGTGGGGACTTATGGCTACATGTCTCCGGAATATGCACTCGAGGGACTATTTTCAGAGAAGTCCGATGTTTTCAGTTTCGGAGTAGTAATACTTGAAATTGTTAGTGGGAAAAGAAACACTGGATTTTATATGTCGGAACAAGCTTTGAGCCTTCTAAGTTATGCATGGAGATTGTGGGGTGAAGGGAAGGTCATAGAATTAATGGATCCTATGCTAAGAGAGAATTGCAATTCAAGTGAGTTTTTGAAGTGTGTTAATATCGGATTATTGTGTGTTCAAGATGACTTGTTTGATCGACCCAACATGTCGAACGTAGTTTATATGCTGGGGAGTGATCATAGTATTGTTTCTCTTCCTCGTCCGAAACAGCCGGCATTTGTTCTAAGGAGATCCCTTACGAATTCAACCACAGCTTCTTCTAGTAAACCAGAAATCAGTAGAGAAGCTACCTTGGAAGAAGGCCGCTAA 3051 40.41 MEATFSTVRWFLSSIFTTIFIFSCLFFLVSVSAARDTMTFSTPVRDDKQSNLVSAGETFELGFFTPNGSSDDKRRYVGIWYYDRTEPPTVVWVANRDREIPNRNGVLKIAEDGNLKVMVRDEPYWTADIQRPLNGIVLKLMDNGNLILIKEGDQDKDINCSIWQSFNFPTDTFLPGMKMVEGLKLTSWIRSDDPAPGKFTFEIDGGDQNQYIINDGIDPHWKSNIWGTESVGIPFSVLDYLSNFTYLNNSRKMFNNFSPQIQFNNPKTVINNSRIVMNYDGQIQFLSFDIKTNSWSKRWYQPKGKCDLANSCGQFASCNSENRFNCKCLPGFIPKSRENWNKGDFQDGCTRKSELTCRNDSDNFLVLRMMEMRKPHLTWPGKGEACKKTCLEKKCKCLAYSESGPESRDSECRIWEEDDEIKNIRESLKGTIYVRVPLSDTELTSKDCPACGTDAIPYPLSNGDCGDPKYQSFFCNTTSAQLYFQTDDDTFYRVTIIVPDNRTFSIKVNKSECDDKDKMGKFLQVNQSSPFFVSKVCTGGWSEVEIGWMPPLEPICTSSDDCKYWSNSICTVTKDGTKRCLCESSFQWNGTNINCTRGVSNFHKGNEGDTLRIIVPVAVATLVVIFCFTFFMFYLRRMNVADTQDQRRNVWENQAFRLYDNEKRVKDFINSRQFGEDDKKQIDVPFFDLDVVLAATDNFSEANKLGQGGFGPVYKGTFPGGQEIAIKMLSRGSGQGLEEFKNEVMLIAKLQHRNLVRLLGYCVEGEEKMLLYEYMPNKSLDSFIFDRTLCLLLNWEIRFNIILGIARGLLYLHQDSRLRIIHRDLKTSNVLLDEEMNPKISDFGLARILGGKETEASTVRVVGTYGYMSPEYALEGLFSEKSDVFSFGVVILEIVSGKRNTGFYMSEQALSLLSYAWRLWGEGKVIELMDPMLRENCNSSEFLKCVNIGLLCVQDDLFDRPNMSNVVYMLGSDHSIVSLPRPKQPAFVLRRSLTNSTTASSSKPEISREATLEEGR 1016
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10183519 10188001 - Conep10aG0134500.1 Cone10ag1305 447103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1305 1016 CDD STKc_IRAK 705 970 - -
Cone10ag1305 1016 Gene3D Phosphorylase Kinase; domain 1 661 774 - -
Cone10ag1305 1016 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 188 IPR036426 -
Cone10ag1305 1016 Gene3D - 29 167 IPR036426 -
Cone10ag1305 1016 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 775 978 - -
Cone10ag1305 1016 SMART serkin_6 699 933 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag1305 1016 Pfam S-locus glycoprotein domain 235 336 IPR000858 GO:0048544(InterPro)
Cone10ag1305 1016 MobiDBLite consensus disorder prediction 994 1016 - -
Cone10ag1305 1016 Pfam D-mannose binding lectin 89 180 IPR001480 -
Cone10ag1305 1016 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 985 - -
Cone10ag1305 1016 ProSiteProfiles Bulb-type lectin domain profile. 44 161 IPR001480 -
Cone10ag1305 1016 ProSiteProfiles Protein kinase domain profile. 699 977 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag1305 1016 Pfam Protein tyrosine and serine/threonine kinase 702 967 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag1305 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag1305 1016 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 664 774 - -
Cone10ag1305 1016 CDD B_lectin 52 169 IPR001480 -
Cone10ag1305 1016 Gene3D Transferase(Phosphotransferase) domain 1 775 978 - -
Cone10ag1305 1016 CDD EGF_CA 306 336 - -
Cone10ag1305 1016 SMART blect_4 41 169 IPR001480 -
Cone10ag1305 1016 SUPERFAMILY Protein kinase-like (PK-like) 682 970 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1305 Cone-Chr10:10183519 Cone12ag1415 Cone-Chr12:10330505 0 dispersed
Cone10ag1305 Cone-Chr10:10183519 Cone12ag1413 Cone-Chr12:10327058 1.93E-217 wgd
Cone10ag1305 Cone-Chr10:10183519 Cone14ag1104 Cone-Chr14:9211550 2.89E-136 wgd
Cone10ag1305 Cone-Chr10:10183519 Cone15ag1114 Cone-Chr15:9112166 2.03E-132 wgd
Cone10ag1305 Cone-Chr10:10183519 Cone3ag1372 Cone-Chr3:32704170 0 wgd
Cone10ag1305 Cone-Chr10:10183519 Cone9ag0121 Cone-Chr9:528827 2.75E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81847 PF00650 CRAL_TRIO 1.10E-33 CL0512 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1305 - - - 0.0