Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1329 ATGGGCGGTTGTGTCTCGATTAGTAGTAAGAGTTCTTGTAGTAGTGGCACAAGAAGAAATGAAGAAAATGTTTCTATTTCTCCCACATGCTTGGATATTGGATTTTGTGGTAAGAAGGGGATAAAGAGAACATTTTCCAGCCACACTGTTGCCTTGCAGCATTTGACATCCGTACCAAACCGAATTTTCACAAACGGAAAGAGTCGCACATCTTGCATATTCACGCAGCAAGGGCGTAAAGGAATAAACCAGGATGCTATGCTCGTGTGGGAAGATTTTATGCCGGAAGATGCAATGTTTTGTGGTGTATTTGACGGTCACGGTCCGCACGGTCATCTTGTTGCTCATAAAGTAAGGGACACCCTCCCAATGTTGCTGGTATCATCCTTACATGCTTCTCAATCAAAGAAAAACCGGCCCAGTACAACTTGTTTTAAAACAAATATAAATAAACCAAATGGGGCTGATTCAGAGAAAGAAGGTTCAGCACAGGAGAACCAAAATTCTTTATGGAAGGAAGCTTTCTTGAAGTCATACAAAGCCATGGACAAGGAACTGAGATCACACCCGAATTTAGATTGTTTTTGTAGCGGTAGTACTGCAGTTACTATAGTCAAACAGGGCTCCAATCTTTTCATGGGAAGTATTGGGGATTCTCGTGCAATTCTGGGTTCTAAGGACAACAATAATTCCACGGTAGCAATCCAGTTGACCATTGATCTAAAACCCGATTTACCAAGAGAAGCCGAAAGAATTAAACGGTGTAGAGGTAGAGTCTTTGCATTGCAAGATGAGCCTGAAGTGTCAAGAGTATGGTTGCCATTTGATGATGCACCTGGGTTAGCCATGGCCCGGGCATTTGGCGATTTCTGTTTGAAGGAATATGGAGTGATCTCTATACCCGAATTCTCACATCGAATACTTACGGACAAAGATCAATTCATTGTTCTTGCCTCAGATGGGGTTTGGGATGTGTTGAGCAATGAAGAGGTGGTGGAGATAGTGTCTACCGCCACAACACGGTCATCGGCCGCCAGATTGGTGGTTGATGCAGCGGCTCGAGAGTGGAAACTCAAGTACCCGACTTCAAAGATGGATGATTGTGCGGTGGTTTGTATATTTTTGGATGGGAAAATGGACTCCGAATCTGATTATGATGAGTTTGTTTATTCTTCCACAACTCTTAAAAGCAATCATTCCGGTAATATTGCTGAAGCAGACGAAGGACAGAAGGCTGAGCCGTCATTGCAAAGGAATTACACAGTGAGATCAGCGGAAGAAGATGACAGTTACGGGAGATTGGCAGTTGAAGTTCAAGGGGAAGTGGAAATGTTAATGGTCGAAGATCAGAGCTGGTCTGGGTTGGAAGGCGTCACGAGAGTGAACTCACTTGTTCATCTGCCAAGATTTTCTGGAGAAAGGCCAATGCCTTGA 1434 43.79 MGGCVSISSKSSCSSGTRRNEENVSISPTCLDIGFCGKKGIKRTFSSHTVALQHLTSVPNRIFTNGKSRTSCIFTQQGRKGINQDAMLVWEDFMPEDAMFCGVFDGHGPHGHLVAHKVRDTLPMLLVSSLHASQSKKNRPSTTCFKTNINKPNGADSEKEGSAQENQNSLWKEAFLKSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGSIGDSRAILGSKDNNNSTVAIQLTIDLKPDLPREAERIKRCRGRVFALQDEPEVSRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRILTDKDQFIVLASDGVWDVLSNEEVVEIVSTATTRSSAARLVVDAAAREWKLKYPTSKMDDCAVVCIFLDGKMDSESDYDEFVYSSTTLKSNHSGNIAEADEGQKAEPSLQRNYTVRSAEEDDSYGRLAVEVQGEVEMLMVEDQSWSGLEGVTRVNSLVHLPRFSGERPMP 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10363256 10367722 - Conep10aG0137100.1 Cone10ag1329 447127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1329 477 ProSiteProfiles PPM-type phosphatase domain profile. 70 375 IPR001932 -
Cone10ag1329 477 PANTHER PROTEIN PHOSPHATASE 71 374 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone10ag1329 477 SMART PP2C_4 59 373 IPR001932 -
Cone10ag1329 477 MobiDBLite consensus disorder prediction 1 21 - -
Cone10ag1329 477 SUPERFAMILY PP2C-like 58 377 IPR036457 -
Cone10ag1329 477 MobiDBLite consensus disorder prediction 133 166 - -
Cone10ag1329 477 Gene3D - 59 377 IPR036457 -
Cone10ag1329 477 FunFam probable protein phosphatase 2C 52 61 378 - -
Cone10ag1329 477 Pfam Protein phosphatase 2C 165 352 IPR001932 -
Cone10ag1329 477 CDD PP2Cc 76 375 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1329 Cone-Chr10:10363256 Cone1ag1702 Cone-Chr1:57974327 2.57E-141 dispersed
Cone4ag1650 Cone-Chr4:12437128 Cone10ag1329 Cone-Chr10:10363256 3.76E-97 transposed
Cone10ag1329 Cone-Chr10:10363256 Cone12ag1441 Cone-Chr12:10420790 1.02E-240 wgd
Cone10ag1329 Cone-Chr10:10363256 Cone3ag1401 Cone-Chr3:32875962 1.35e-319 wgd
Cone10ag1329 Cone-Chr10:10363256 Cone8ag1481 Cone-Chr8:11312853 3.72E-235 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1329 - - - 0.0