Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1360 ATGGGCACAATCTGTGCTGAGCAACACAAGTTCCACCCTTCTCACCAAATCCTCCCATCCAAAAAAACCCTCCTCCTCAAGGACATCAACATCCGGCCTAGGAAACTCCTCGGCCGACACAACCACAACGGCGGTCTCGACGATAGTCCTGACATGTTCTCCGGCTCTCCCAATTCGTCCCGCGGCTTCTCTTTCTCCGGGGATGCGCTTTTGCAGAAGTTCCTGTCTTATAAGAATATCAATAGGAGTGATGGTGGCGATAGTCGTAGCGGTGGTGCGGATTATCCTCATAATGATGAGGAAAGCGATGATGAAGACTTGTACTCATCCGATAATTTCCGGATGTACGAGTGTAAGGTCCGTAGATGTACTCGGAGCCGTAGTCACGATTGGACCGAATGCCCTTTTGCTCATCCCGGGGAAAAGGCCCGCAGGCGGGATCCACGGAGGTTTCAGTATTCTGGGACGGTTTGTCCGGATTTTCACCATGGGGGATGTAGCCGAGGCGATTGTTGCGGGTTTGCTCATGGTGTTTTCGAGTGCTGGCTTCATCCGGCTAGGTATCGAACGGAGGCATGCAGGGATGGAAAGAATTGTAAGAGAAAGATCTGTTTCTTCGCGCACACTCCCAAACAAATTAGGGTTTTACCGGTGAATGGTTTCGGTCAAAACTCTTGCGCTTCTTCTCCTCCTTCCCAGGAGATTTCGAGCAACAAGAAGACTAATAACTCGAACAACTGTTGTTTATGTTGTCGCTGTGGGACGAATTCGACTTCTTCACCAACATCTACTCTTCTGGGGATGTCTCATTTCTCTCCACCGATTTCTCCGCCTTTATCTCCGGCAAAACAGAGCTCTCTGAACGGATTTTCGCCCGTTTCAGGGTATAATGCTATGGATCAATCGAAATTGAGCGTGTTGAGCGAGCTCATGAGCTCATTGGAGGCTATGAATTTCAATGACGTTAATAGGTCTCCCACCATTAATAACGATGCTCCTCACTGCGGGTTCAACCCTAACAGGGGTTTGAGTTTGCAATGGGTTAATGATGACTTCAATAATCAGCAACAATTCCTTCTTTCCCCTTCGAGTAGTAGTAGTACTCCTCAAAGTGCTTCTTCTAGGGGGACTAGGACTTCATGGTTCGACGACGGGTTTCCCAACGGGGCCCGCGTTAACAATGTCTATCAAAACGATCCGGACCTCGGATGGGTTAATGATTTACTCATGTAA 1233 48.74 MGTICAEQHKFHPSHQILPSKKTLLLKDINIRPRKLLGRHNHNGGLDDSPDMFSGSPNSSRGFSFSGDALLQKFLSYKNINRSDGGDSRSGGADYPHNDEESDDEDLYSSDNFRMYECKVRRCTRSRSHDWTECPFAHPGEKARRRDPRRFQYSGTVCPDFHHGGCSRGDCCGFAHGVFECWLHPARYRTEACRDGKNCKRKICFFAHTPKQIRVLPVNGFGQNSCASSPPSQEISSNKKTNNSNNCCLCCRCGTNSTSSPTSTLLGMSHFSPPISPPLSPAKQSSLNGFSPVSGYNAMDQSKLSVLSELMSSLEAMNFNDVNRSPTINNDAPHCGFNPNRGLSLQWVNDDFNNQQQFLLSPSSSSSTPQSASSRGTRTSWFDDGFPNGARVNNVYQNDPDLGWVNDLLM 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10597164 10598396 + Conep10aG0140200.1 Cone10ag1360 447158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1360 410 ProSiteProfiles Zinc finger C3H1-type profile. 152 179 IPR000571 GO:0046872(InterPro)
Cone10ag1360 410 MobiDBLite consensus disorder prediction 82 106 - -
Cone10ag1360 410 Gene3D - 152 215 - -
Cone10ag1360 410 PANTHER UNKEMPT FAMILY MEMBER 60 372 IPR045234 -
Cone10ag1360 410 MobiDBLite consensus disorder prediction 360 383 - -
Cone10ag1360 410 SMART c3hfinal6 187 210 IPR000571 GO:0046872(InterPro)
Cone10ag1360 410 SMART c3hfinal6 152 178 IPR000571 GO:0046872(InterPro)
Cone10ag1360 410 MobiDBLite consensus disorder prediction 37 59 - -
Cone10ag1360 410 MobiDBLite consensus disorder prediction 360 381 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1360 Cone-Chr10:10597164 Cone4ag0778 Cone-Chr4:4585632 3.76E-61 dispersed
Cone10ag1360 Cone-Chr10:10597164 Cone3ag1431 Cone-Chr3:33072732 1.50E-230 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1360 K23047 - mtr:25487687 349.362