Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag1367 | ATGCTTAAGGACATGGTGGGGACACGAGATGATCTTGGGCCAGGTGATCAGGGGCCTTCTAGTAATACTTCCAAGTGGTCCTCCAATTTCATGGAGGAAATTGAATCCTTCTCCTCAGGTTCTCATAAAGAGATTAACAAAGAGACGCATAGAAATTCAGAGCAAGATATGCTGTCTCCTCAGACAGCATCTCAAGTTTTTTGGTGCACAGGAATGTACTCTGAACCAATTCCAAATGGTTTCTATTCTGTAATTCCGGATAAAAAGCTTAAGGAGCAGTTTGATAACATTCCTGCCCTGGATGAGCTACGTGCTCTGGAGATTGAGGGTTTTAGAGCTGATGTTATTTTGGTAGAATCTGATCAAGATAAGAAACTATCTATGCTGAAGCAACTAACTTCCTCTCTCGTGAAAGGATTAAATTCTAATCCAGCTACAATGATTAAGAAGATTGCTGCATTGGTTTGTGATTTTTATAAAGGTCCAATTTCAGAAAGTCCATCAAAATCTGTAGCAGAAGAAACGTCCAACACGTTTGAAGATCATCGAGTCCAACTGCTGGGGCAAATAAAGCATGGTTCATGCCGCCCTAGGGCAATCTTGTTTAAGGTGTTAGCCGATACTGTGGGTCTTGAAAGCCAACTTGTGGTGGGTCTACCAATGCCAAATGATGGGGGTGCTGAATTTTTAGAGCCCTACAGACATGTGTCTGTGATAGTTGTGTTAAACTCTGTGGAACTATTAGTGGATCTTATACGATTTCCTGGCCAGTTGTTACCCCCCTCAACCAAGGCAGTTTTTATGACTCATGTTTCTGCAACTGGGGAGAGTGATTCTGCAGAAAATGACTCTTGCGATTCGCCACTAGAGCCGAATAGTCCTCTACATGGATTTTCAGAGAGAGTTGATCTTGACAGTACTGAAAGAGATGACATCCTTCAGTTCCATAGAAAAAACGAAGCATCTTCAAATGCTTCACTGCGACATGCAATGATGCGATGGGCTACAGTTGTGGACAGAGAACTAAGCTCATCCCATAGCGAACCAAACATTGCAACTGCATTTTGGCGGCGTAGTCGAAGAAAAGTTATTGCTGATCAACGGACGGCTAGTATAAGTCCTGAGCACCCTCTGTTTCGAGCACGTGGGCGTTCCATGCTTAGCGGTGATAGGAAGGATTTCAGAGACTTTTCTGATGATACCTCTACATCAAGATCCACTGGTGCTTCAACGTCCGAGTCTCGTCTAATGAGGAGAAGAAGCATTAGCATTCCAGAAATTGGAGACGATATTGTAAGGGCTGTTCGAGCGATGAACGATAAAATGAAGCAGAATCGAATTTCAAGAGAGCGAGGAGATGATGTCAATGGAAATAGGAGTTCCGATATTCAGAAAAATGACCAGTTAGGTTGGCAAAGAGCAGTGTCATTACCTTCATCTCCGCATGAATATAGGGGTGAAAATTCTAAAAGAGGTGGACCTTCAGAATACACAGTAAATGATGACTTGGTCTCAGCATGGAATAAGGTTCTTGACTCTTATGGCTTGAATAACAAACCTCTCTTGCCTTACCAAGAATGGAATATCGATTTCGCAGAGTTGACAGTTGGAATTCGTATTGGAATAGGATTCTTTGGAGAGGTATTTCGTGGTGTATGGAATGGAACAGATGTTGCAATTAAAGTTTTCCTCGAGCAAGATTTAACCACTGAAAACATGGAAGACTTTTGCAATGAGATTTCAATTCTCAGCCGCCTCCGCCATCCTAATGTTATTTTATTTTTGGGTGCTTGCACAAAACCTCCACTCTTGTCTATGGTTACTGAATACATGGAAATGGGTTCCTTGTACTCTTTAATCCATTTAAGTGGCTACAAGAAAAAACTCAGCTGGCGTAGAAGACTAAAAATGTTGCGCGACATATGCAGGGGGTTAATGTGCATACACCGGATGAAGATAGTTCATAGGGACTTGAAGAGTGCGAATTGCCTAGTCAATAAGCATTGGATGGTCAAGATCTGTGATTTCGGACTCTCGAGAATATTGACTGGCGAACGGACAGCCATGATGGACTCCCCATCTGCTGGAACTTCGGAATGGATGGCCCCAGAGCTATTCAGAAACGAACCGCTCACTGAAAAGTGTGATATTTTCAGCCTGGGTGTCATCATGTGGGAACTCTGCACTCTAAATAGACCATGGGAAGGTGTCCCACCAGAAAAGGTCATTTATGCTGTTAGCACGGAGGGATTGAGGTTAGAGATTCCGGAAGGTCCTCTCAGCCAACTAATTTCAGATTGTTGGGCTGAACCGCTAGAACGGCCGAGCTGCGAGGAGATTCTCTCTCGCTTGATAGACTGCGAGTTCTCATTGTGCTGA | 2379 | 43.38 | MLKDMVGTRDDLGPGDQGPSSNTSKWSSNFMEEIESFSSGSHKEINKETHRNSEQDMLSPQTASQVFWCTGMYSEPIPNGFYSVIPDKKLKEQFDNIPALDELRALEIEGFRADVILVESDQDKKLSMLKQLTSSLVKGLNSNPATMIKKIAALVCDFYKGPISESPSKSVAEETSNTFEDHRVQLLGQIKHGSCRPRAILFKVLADTVGLESQLVVGLPMPNDGGAEFLEPYRHVSVIVVLNSVELLVDLIRFPGQLLPPSTKAVFMTHVSATGESDSAENDSCDSPLEPNSPLHGFSERVDLDSTERDDILQFHRKNEASSNASLRHAMMRWATVVDRELSSSHSEPNIATAFWRRSRRKVIADQRTASISPEHPLFRARGRSMLSGDRKDFRDFSDDTSTSRSTGASTSESRLMRRRSISIPEIGDDIVRAVRAMNDKMKQNRISRERGDDVNGNRSSDIQKNDQLGWQRAVSLPSSPHEYRGENSKRGGPSEYTVNDDLVSAWNKVLDSYGLNNKPLLPYQEWNIDFAELTVGIRIGIGFFGEVFRGVWNGTDVAIKVFLEQDLTTENMEDFCNEISILSRLRHPNVILFLGACTKPPLLSMVTEYMEMGSLYSLIHLSGYKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWMVKICDFGLSRILTGERTAMMDSPSAGTSEWMAPELFRNEPLTEKCDIFSLGVIMWELCTLNRPWEGVPPEKVIYAVSTEGLRLEIPEGPLSQLISDCWAEPLERPSCEEILSRLIDCEFSLC | 792 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10649005 | 10655936 | + | Conep10aG0140900.1 | Cone10ag1367 | 447165 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag1367 | 792 | MobiDBLite | consensus disorder prediction | 461 | 475 | - | - | |
Cone10ag1367 | 792 | Gene3D | Transferase(Phosphotransferase) domain 1 | 613 | 790 | - | - | |
Cone10ag1367 | 792 | MobiDBLite | consensus disorder prediction | 37 | 54 | - | - | |
Cone10ag1367 | 792 | CDD | STKc_MAP3K-like | 540 | 784 | - | - | |
Cone10ag1367 | 792 | ProSitePatterns | Protein kinases ATP-binding region signature. | 540 | 561 | IPR017441 | GO:0005524(InterPro) | |
Cone10ag1367 | 792 | MobiDBLite | consensus disorder prediction | 390 | 420 | - | - | |
Cone10ag1367 | 792 | MobiDBLite | consensus disorder prediction | 442 | 497 | - | - | |
Cone10ag1367 | 792 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Cone10ag1367 | 792 | Pfam | Protein tyrosine and serine/threonine kinase | 536 | 784 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag1367 | 792 | MobiDBLite | consensus disorder prediction | 15 | 36 | - | - | |
Cone10ag1367 | 792 | ProSiteProfiles | Protein kinase domain profile. | 534 | 789 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone10ag1367 | 792 | SMART | serkin_6 | 534 | 785 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone10ag1367 | 792 | MobiDBLite | consensus disorder prediction | 401 | 418 | - | - | |
Cone10ag1367 | 792 | MobiDBLite | consensus disorder prediction | 442 | 460 | - | - | |
Cone10ag1367 | 792 | MobiDBLite | consensus disorder prediction | 276 | 301 | - | - | |
Cone10ag1367 | 792 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 653 | 665 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag1367 | 792 | Gene3D | Phosphorylase Kinase; domain 1 | 523 | 612 | - | - | |
Cone10ag1367 | 792 | SUPERFAMILY | Protein kinase-like (PK-like) | 513 | 784 | IPR011009 | - | |
Cone10ag1367 | 792 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 61 | 258 | - | - | |
Cone10ag1367 | 792 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 183 | 784 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cone10ag1367 | 792 | FunFam | Serine/threonine-protein kinase isoform 1 | 525 | 612 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag1367 | Cone-Chr10:10649005 | Cone19ag0331 | Cone-Chr19:2671450 | 5.56E-76 | dispersed | |
Cone10ag1367 | Cone-Chr10:10649005 | Cone12ag1487 | Cone-Chr12:10611532 | 0 | wgd | |
Cone10ag1367 | Cone-Chr10:10649005 | Cone8ag1535 | Cone-Chr8:11531445 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81851 | PF05542 | DUF760 | 3.40E-32 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag1367 | - | - | - | 0.0 |