Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1367 ATGCTTAAGGACATGGTGGGGACACGAGATGATCTTGGGCCAGGTGATCAGGGGCCTTCTAGTAATACTTCCAAGTGGTCCTCCAATTTCATGGAGGAAATTGAATCCTTCTCCTCAGGTTCTCATAAAGAGATTAACAAAGAGACGCATAGAAATTCAGAGCAAGATATGCTGTCTCCTCAGACAGCATCTCAAGTTTTTTGGTGCACAGGAATGTACTCTGAACCAATTCCAAATGGTTTCTATTCTGTAATTCCGGATAAAAAGCTTAAGGAGCAGTTTGATAACATTCCTGCCCTGGATGAGCTACGTGCTCTGGAGATTGAGGGTTTTAGAGCTGATGTTATTTTGGTAGAATCTGATCAAGATAAGAAACTATCTATGCTGAAGCAACTAACTTCCTCTCTCGTGAAAGGATTAAATTCTAATCCAGCTACAATGATTAAGAAGATTGCTGCATTGGTTTGTGATTTTTATAAAGGTCCAATTTCAGAAAGTCCATCAAAATCTGTAGCAGAAGAAACGTCCAACACGTTTGAAGATCATCGAGTCCAACTGCTGGGGCAAATAAAGCATGGTTCATGCCGCCCTAGGGCAATCTTGTTTAAGGTGTTAGCCGATACTGTGGGTCTTGAAAGCCAACTTGTGGTGGGTCTACCAATGCCAAATGATGGGGGTGCTGAATTTTTAGAGCCCTACAGACATGTGTCTGTGATAGTTGTGTTAAACTCTGTGGAACTATTAGTGGATCTTATACGATTTCCTGGCCAGTTGTTACCCCCCTCAACCAAGGCAGTTTTTATGACTCATGTTTCTGCAACTGGGGAGAGTGATTCTGCAGAAAATGACTCTTGCGATTCGCCACTAGAGCCGAATAGTCCTCTACATGGATTTTCAGAGAGAGTTGATCTTGACAGTACTGAAAGAGATGACATCCTTCAGTTCCATAGAAAAAACGAAGCATCTTCAAATGCTTCACTGCGACATGCAATGATGCGATGGGCTACAGTTGTGGACAGAGAACTAAGCTCATCCCATAGCGAACCAAACATTGCAACTGCATTTTGGCGGCGTAGTCGAAGAAAAGTTATTGCTGATCAACGGACGGCTAGTATAAGTCCTGAGCACCCTCTGTTTCGAGCACGTGGGCGTTCCATGCTTAGCGGTGATAGGAAGGATTTCAGAGACTTTTCTGATGATACCTCTACATCAAGATCCACTGGTGCTTCAACGTCCGAGTCTCGTCTAATGAGGAGAAGAAGCATTAGCATTCCAGAAATTGGAGACGATATTGTAAGGGCTGTTCGAGCGATGAACGATAAAATGAAGCAGAATCGAATTTCAAGAGAGCGAGGAGATGATGTCAATGGAAATAGGAGTTCCGATATTCAGAAAAATGACCAGTTAGGTTGGCAAAGAGCAGTGTCATTACCTTCATCTCCGCATGAATATAGGGGTGAAAATTCTAAAAGAGGTGGACCTTCAGAATACACAGTAAATGATGACTTGGTCTCAGCATGGAATAAGGTTCTTGACTCTTATGGCTTGAATAACAAACCTCTCTTGCCTTACCAAGAATGGAATATCGATTTCGCAGAGTTGACAGTTGGAATTCGTATTGGAATAGGATTCTTTGGAGAGGTATTTCGTGGTGTATGGAATGGAACAGATGTTGCAATTAAAGTTTTCCTCGAGCAAGATTTAACCACTGAAAACATGGAAGACTTTTGCAATGAGATTTCAATTCTCAGCCGCCTCCGCCATCCTAATGTTATTTTATTTTTGGGTGCTTGCACAAAACCTCCACTCTTGTCTATGGTTACTGAATACATGGAAATGGGTTCCTTGTACTCTTTAATCCATTTAAGTGGCTACAAGAAAAAACTCAGCTGGCGTAGAAGACTAAAAATGTTGCGCGACATATGCAGGGGGTTAATGTGCATACACCGGATGAAGATAGTTCATAGGGACTTGAAGAGTGCGAATTGCCTAGTCAATAAGCATTGGATGGTCAAGATCTGTGATTTCGGACTCTCGAGAATATTGACTGGCGAACGGACAGCCATGATGGACTCCCCATCTGCTGGAACTTCGGAATGGATGGCCCCAGAGCTATTCAGAAACGAACCGCTCACTGAAAAGTGTGATATTTTCAGCCTGGGTGTCATCATGTGGGAACTCTGCACTCTAAATAGACCATGGGAAGGTGTCCCACCAGAAAAGGTCATTTATGCTGTTAGCACGGAGGGATTGAGGTTAGAGATTCCGGAAGGTCCTCTCAGCCAACTAATTTCAGATTGTTGGGCTGAACCGCTAGAACGGCCGAGCTGCGAGGAGATTCTCTCTCGCTTGATAGACTGCGAGTTCTCATTGTGCTGA 2379 43.38 MLKDMVGTRDDLGPGDQGPSSNTSKWSSNFMEEIESFSSGSHKEINKETHRNSEQDMLSPQTASQVFWCTGMYSEPIPNGFYSVIPDKKLKEQFDNIPALDELRALEIEGFRADVILVESDQDKKLSMLKQLTSSLVKGLNSNPATMIKKIAALVCDFYKGPISESPSKSVAEETSNTFEDHRVQLLGQIKHGSCRPRAILFKVLADTVGLESQLVVGLPMPNDGGAEFLEPYRHVSVIVVLNSVELLVDLIRFPGQLLPPSTKAVFMTHVSATGESDSAENDSCDSPLEPNSPLHGFSERVDLDSTERDDILQFHRKNEASSNASLRHAMMRWATVVDRELSSSHSEPNIATAFWRRSRRKVIADQRTASISPEHPLFRARGRSMLSGDRKDFRDFSDDTSTSRSTGASTSESRLMRRRSISIPEIGDDIVRAVRAMNDKMKQNRISRERGDDVNGNRSSDIQKNDQLGWQRAVSLPSSPHEYRGENSKRGGPSEYTVNDDLVSAWNKVLDSYGLNNKPLLPYQEWNIDFAELTVGIRIGIGFFGEVFRGVWNGTDVAIKVFLEQDLTTENMEDFCNEISILSRLRHPNVILFLGACTKPPLLSMVTEYMEMGSLYSLIHLSGYKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWMVKICDFGLSRILTGERTAMMDSPSAGTSEWMAPELFRNEPLTEKCDIFSLGVIMWELCTLNRPWEGVPPEKVIYAVSTEGLRLEIPEGPLSQLISDCWAEPLERPSCEEILSRLIDCEFSLC 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10649005 10655936 + Conep10aG0140900.1 Cone10ag1367 447165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1367 792 MobiDBLite consensus disorder prediction 461 475 - -
Cone10ag1367 792 Gene3D Transferase(Phosphotransferase) domain 1 613 790 - -
Cone10ag1367 792 MobiDBLite consensus disorder prediction 37 54 - -
Cone10ag1367 792 CDD STKc_MAP3K-like 540 784 - -
Cone10ag1367 792 ProSitePatterns Protein kinases ATP-binding region signature. 540 561 IPR017441 GO:0005524(InterPro)
Cone10ag1367 792 MobiDBLite consensus disorder prediction 390 420 - -
Cone10ag1367 792 MobiDBLite consensus disorder prediction 442 497 - -
Cone10ag1367 792 MobiDBLite consensus disorder prediction 1 58 - -
Cone10ag1367 792 Pfam Protein tyrosine and serine/threonine kinase 536 784 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag1367 792 MobiDBLite consensus disorder prediction 15 36 - -
Cone10ag1367 792 ProSiteProfiles Protein kinase domain profile. 534 789 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag1367 792 SMART serkin_6 534 785 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag1367 792 MobiDBLite consensus disorder prediction 401 418 - -
Cone10ag1367 792 MobiDBLite consensus disorder prediction 442 460 - -
Cone10ag1367 792 MobiDBLite consensus disorder prediction 276 301 - -
Cone10ag1367 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag1367 792 Gene3D Phosphorylase Kinase; domain 1 523 612 - -
Cone10ag1367 792 SUPERFAMILY Protein kinase-like (PK-like) 513 784 IPR011009 -
Cone10ag1367 792 Pfam Ethylene-responsive protein kinase Le-CTR1 61 258 - -
Cone10ag1367 792 PANTHER SERINE-THREONINE PROTEIN KINASE 183 784 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone10ag1367 792 FunFam Serine/threonine-protein kinase isoform 1 525 612 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1367 Cone-Chr10:10649005 Cone19ag0331 Cone-Chr19:2671450 5.56E-76 dispersed
Cone10ag1367 Cone-Chr10:10649005 Cone12ag1487 Cone-Chr12:10611532 0 wgd
Cone10ag1367 Cone-Chr10:10649005 Cone8ag1535 Cone-Chr8:11531445 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81851 PF05542 DUF760 3.40E-32 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1367 - - - 0.0