Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1369 ATGGCTTCCTCCGCTAAAGATCGCGAGAGCTTTGTCTATATCGCCAAGCTTGCCGAGCAGGCCGAGCGTTATGACGAGATGGTGGAGGCAATGAAGAATATTGCTAAACTCGACGTTGAACTGACAATCGAAGAGCGAAATTTGCTCTCTGTTGGGTATAAGAATATTGTTGGAGCCCGAAGAGCTTCATGGAGGATCCTGTCATCCATAGAGCAGAAGGAGGAATCAAAAGGGAATGATCTGAATGCGAAAAGGATCAAGGAATATAGACACAAGGTTGAAACAGAGCTGTCAACCATTTGTGATGATATCATGACAGTGATAAATGAGCATCTAATCCCTTCAGCTACAGCTGGTGAATCAACAGTGTTCTACTATAAGATGAAGGGGGATTATTATCGGTACCTTGCAGAATTCAAGTCAGGTAATGAGAAGAAAGAGGCTGCTGATCAATCAATGAAGGCTTATGAGGCTGCAACCAGCACAGCAGAAACTGACTTACCCCCGACACATCCTATCCGATTGGGTTTGGCTCTAAATTTCTCTGTCTTCTATTATGAGATCCTGAACTCACCCGAAAGGGCCTGCCATCTTGCTAAACAAGCTTTTGATGAAGCCATCTCAGAACTTGACTCTCTCAATGAGGAGTCATACAAGGATAGCACCTTAATTATGCAGCTGCTTAGGGACAATCTTACCTTGTGGACTTCTGACATCCCGGAGGATGGAGACGCTCAGAAGTTAAATGGTGTTTCCAAGATTGTTGGGGCAGAAGAGGCAGAGTGA 786 44.78 MASSAKDRESFVYIAKLAEQAERYDEMVEAMKNIAKLDVELTIEERNLLSVGYKNIVGARRASWRILSSIEQKEESKGNDLNAKRIKEYRHKVETELSTICDDIMTVINEHLIPSATAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYEAATSTAETDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDSLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDAQKLNGVSKIVGAEEAE 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10676164 10679840 + Conep10aG0141100.1 Cone10ag1369 447167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1369 261 FunFam 14-3-3 protein epsilon 3 249 - -
Cone10ag1369 261 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Cone10ag1369 261 Coils Coil 14 34 - -
Cone10ag1369 261 SMART 1433_4 8 249 IPR023410 -
Cone10ag1369 261 PIRSF 14-3-3 2 248 IPR000308 -
Cone10ag1369 261 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Cone10ag1369 261 Pfam 14-3-3 protein 15 236 IPR023410 -
Cone10ag1369 261 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Cone10ag1369 261 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone10ag1369 261 Gene3D - 1 250 IPR036815 -
Cone10ag1369 261 Coils Coil 196 216 - -
Cone10ag1369 261 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Cone10ag1369 261 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cone10ag1369 261 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cone10ag1369 261 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cone10ag1369 261 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Cone10ag1369 261 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1369 Cone-Chr10:10676164 Cone19ag0905 Cone-Chr19:7049179 9.68E-126 dispersed
Cone10ag1369 Cone-Chr10:10676164 Cone12ag1494 Cone-Chr12:10639339 3.24E-158 wgd
Cone10ag1369 Cone-Chr10:10676164 Cone3ag1440 Cone-Chr3:33138335 1.10E-181 wgd
Cone10ag1369 Cone-Chr10:10676164 Cone8ag1540 Cone-Chr8:11568544 2.66E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1369 K06630 - gmx:100801348 459.914