Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag1396 | ATGTGCAGGACGATCGAAGTGGATGCAATCGAGCACCACCACCACCACCACAGGAATCGGAGCTTTTCGCTGTCCGCTGAGGTGGAGGACGGTGAAGATTGCAACACGGATGTTGAGGAGGACGGCCTCTTCGTTCCTCCACTTAACTTTGCAATGGTTGACAAAGGCATTTTTCGCTCTGGTTTTCCTGATTCTGCTAACTTATCCTTCTTACAAACTCTAGGCCTCCGCTCCGTAATATATCTGTGTCCGGAGCCCTATCCGGAGGTAAACATGGAGTTCCTCAAGTCGAATGGGATAAGGCTCTATCAATTTGGGATTGAAGGCTATAAGGAGCCTTTTGTGAATATGCCTGAGGCTACAATCCTTGAAGCACTGAAAATTCTCCTCGATGTAAGGAATCATCCGGTTCTAATACATTGTAATAGAGGAAAGCATCGAACTGGTTGTCTTGTCGGATGCTTGAGAAAATTGCAAAGATGGGGTCTCTCATCTATTTTCGATGAGTACCGGAAATTTGCTGCTGCCAAAGCCAGAGTCTCTGACCAAAGGTTTATGGAGTTGTTTGATATCTCTAGCTTAAAGCATCTACCAATGTCATTTTCATTCTCCAAGAGGTAA | 621 | 45.41 | MCRTIEVDAIEHHHHHHRNRSFSLSAEVEDGEDCNTDVEEDGLFVPPLNFAMVDKGIFRSGFPDSANLSFLQTLGLRSVIYLCPEPYPEVNMEFLKSNGIRLYQFGIEGYKEPFVNMPEATILEALKILLDVRNHPVLIHCNRGKHRTGCLVGCLRKLQRWGLSSIFDEYRKFAAAKARVSDQRFMELFDISSLKHLPMSFSFSKR | 206 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10862174 | 10865153 | - | Conep10aG0143800.1 | Cone10ag1396 | 447194 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag1396 | 206 | PRINTS | Plant and fungal dual specificity phosphatase signature | 81 | 94 | IPR020428 | GO:0016791(InterPro) | |
Cone10ag1396 | 206 | PRINTS | Plant and fungal dual specificity phosphatase signature | 44 | 61 | IPR020428 | GO:0016791(InterPro) | |
Cone10ag1396 | 206 | PRINTS | Plant and fungal dual specificity phosphatase signature | 117 | 131 | IPR020428 | GO:0016791(InterPro) | |
Cone10ag1396 | 206 | PRINTS | Plant and fungal dual specificity phosphatase signature | 100 | 114 | IPR020428 | GO:0016791(InterPro) | |
Cone10ag1396 | 206 | FunFam | probable tyrosine-protein phosphatase At1g05000 | 43 | 193 | - | - | |
Cone10ag1396 | 206 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 139 | 149 | IPR016130 | GO:0016311(InterPro) | |
Cone10ag1396 | 206 | Gene3D | Protein tyrosine phosphatase superfamily | 43 | 193 | IPR029021 | - | |
Cone10ag1396 | 206 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 49 | 203 | IPR020422 | GO:0006470(InterPro) | |
Cone10ag1396 | 206 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 25 | 199 | - | GO:0005737(PANTHER)|GO:0016791(PANTHER) | |
Cone10ag1396 | 206 | Pfam | Tyrosine phosphatase family | 45 | 196 | IPR004861 | - | |
Cone10ag1396 | 206 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 44 | 191 | IPR029021 | - | |
Cone10ag1396 | 206 | CDD | PFA-DSP_Siw14 | 43 | 190 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag1396 | Cone-Chr10:10862174 | Cone5ag1838 | Cone-Chr5:12920068 | 1.17E-95 | dispersed | |
Cone10ag1396 | Cone-Chr10:10862174 | Cone12ag1505 | Cone-Chr12:10695053 | 5.03E-108 | wgd | |
Cone10ag1396 | Cone-Chr10:10862174 | Cone8ag1552 | Cone-Chr8:11633645 | 1.32E-100 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag1396 | K18045 | - | vvi:100251662 | 305.064 |