Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1423 ATGGCCTATGAACCTCTTATACCAAGAAGAACAACACACGAGGTAGAAGACGATCTGATCAGACCATCTTCAAGAAGAGACTTGTTAGCTTCTTCTTCAATCAATCGTGATCATGGTCACAATCATGGCCGTCCATGGCGTCAATCAACGGCGCATCTCCTCCCAACTGATTCCATCATGCCCATTTTAGCCTCAACCCCAAGACCTTCTTATATAAACCTCTTAGCCAATTTGAACCGGACCCGAAAAATACTAGCCCCTCGCCGTTCACATTCCGCTCCGGCCCTTCTGTCCGATTTCAAAATCTCTCTCCAAAAAGATCCCTTAAACCGAAGGCCGGAGCCCAAATCTAAACGTTTGATAGTATGGCAAGCCTCTATAGGTATGGCCCTTTACGTCATTGTAGGCATTGCTATCTTTTGCACGGTAGGAAGTTTGACGGGAGAATCGACTTATAAAGTTATAGATGCCTTGTATTTCATAGTGGTTAGTCTTTGCACGATTGGGTACGGAGATATAGTGCCTGACTCTGATTTTAGCAAACTCTTCACATGTCTATTCATTCTAGTCGGGTTTGGATTTATCGATATTTTGCTAGACGGGTTAGTTTCTTACATCTGTTATAGGCAAGAACAGGTCTTACTGAGCACGGTGGATGCGAACCGGTTTGATACGATGCTTAAAACGTATATAGTCGATAAGGAGAAGGGGAGAATGAGGATAAGGACTAAGGTGGTTTTGGCCTTAGCCGTTGTGATTTTGTGCATTACTATAGGCACGTTTGGAGCGCATTTTTTGGAGGGTTTGAGCTGGGTTGATAGTGTGTATCTATCAGTTATTTCTGTTACGACGGTTGGTTACGGGGATTATTCCTTTTCAACCGTAAAGGGGAGGTGTTTTGCTGTTTTTTGGTTGTTGGTTAGCACGTTGGCCGTGGCGAGGGCGTTTTTGTGCTTGGCCGAGTTGAGGATTGATAAGAGGAACCGTATGGTTGCGAAATGGGTCTTGCAGAAGAAGATCAATTTGGAGGATTTAGTTGCTGCTGATCTTGATAATGATGGCTCCATAAGTAAATCTGAATTTCTGATATACAAGCTGAAGGAGATGGGGAAAATAGCAGAGAAAGACATTTTGCAGATTGGGAAACAGTTTGATTTGCTTGATAGTACTAATAATGGAAAGATCACATTAGCTGATCTCATGGACAGTGGATGA 1215 43.21 MAYEPLIPRRTTHEVEDDLIRPSSRRDLLASSSINRDHGHNHGRPWRQSTAHLLPTDSIMPILASTPRPSYINLLANLNRTRKILAPRRSHSAPALLSDFKISLQKDPLNRRPEPKSKRLIVWQASIGMALYVIVGIAIFCTVGSLTGESTYKVIDALYFIVVSLCTIGYGDIVPDSDFSKLFTCLFILVGFGFIDILLDGLVSYICYRQEQVLLSTVDANRFDTMLKTYIVDKEKGRMRIRTKVVLALAVVILCITIGTFGAHFLEGLSWVDSVYLSVISVTTVGYGDYSFSTVKGRCFAVFWLLVSTLAVARAFLCLAELRIDKRNRMVAKWVLQKKINLEDLVAADLDNDGSISKSEFLIYKLKEMGKIAEKDILQIGKQFDLLDSTNNGKITLADLMDSG 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11013242 11015222 + Conep10aG0146600.1 Cone10ag1423 447221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1423 404 FunFam Two-pore potassium channel 2-like 223 347 - -
Cone10ag1423 404 Pfam Ion channel 251 319 IPR013099 -
Cone10ag1423 404 Pfam Ion channel 133 204 IPR013099 -
Cone10ag1423 404 ProSitePatterns EF-hand calcium-binding domain. 349 361 IPR018247 -
Cone10ag1423 404 Gene3D - 108 210 - -
Cone10ag1423 404 SUPERFAMILY EF-hand 346 401 IPR011992 -
Cone10ag1423 404 Pfam EF hand 343 361 IPR002048 GO:0005509(InterPro)
Cone10ag1423 404 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 114 175 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER)
Cone10ag1423 404 Gene3D - 343 403 - -
Cone10ag1423 404 PRINTS Two pore domain K+ channel signature 163 191 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone10ag1423 404 PRINTS Two pore domain K+ channel signature 283 292 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone10ag1423 404 Gene3D - 212 342 - -
Cone10ag1423 404 SUPERFAMILY Voltage-gated potassium channels 111 206 - -
Cone10ag1423 404 SUPERFAMILY Voltage-gated potassium channels 235 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1423 Cone-Chr10:11013242 Cone19ag0587 Cone-Chr19:5180283 1.18E-101 dispersed
Cone3ag1489 Cone-Chr3:33540578 Cone10ag1423 Cone-Chr10:11013242 2.37E-257 transposed
Cone10ag1423 Cone-Chr10:11013242 Cone5ag1609 Cone-Chr5:11296569 2.25E-98 wgd
Cone10ag1423 Cone-Chr10:11013242 Cone5ag1609 Cone-Chr5:11296569 2.25E-98 wgd
Cone10ag1423 Cone-Chr10:11013242 Cone6ag0909 Cone-Chr6:4668373 3.37E-28 wgd
Cone10ag1423 Cone-Chr10:11013242 Cone9ag0915 Cone-Chr9:4502453 7.53E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1423 K05389 - vvi:100262479 479.559