Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag1425 ATGGTGGGATATTCACCACCAAATATTCTCATCTTACCTCTGTTTCTTCATCTTTGCGTCTTCTCTAGCCTAGTTTCTGTCTCTCAAGCTCAGAATCAAACTCAAAACGCTACCACTGATCCTGCCGAAGCGAAAGCTCTGAATTCAATCTTTGAAGTATGGAATATCAAGGCGAATACGGCACAATGGAACATAAGTGGAGAGCTATGCAGCGGAAATGCCATAGACACGGCCACCACCATTGATGACACCACTTACAACCCCTTTATCAAATGTGACTGTTCTGATAACAATGGCACTACTTGCCACATCACCGCCCTGAAGGTTTATGCAGTGGATGTTGTTGGTGTACTTCCGGACGAACTCTGGACCTTGACCTACCTCACCAATCTAAACTTGGCTCAGAACTACCTGACAGGTCCCGTGTCTGCGTCAATAGGCAATTTAACTCGGATGCAATACTTGAATATTGGCATTAATGCTTTATCCGGGGAGCTTCCTAAGGAACTTGGAAACCTTACGAATTTGGTATCAATCGGTTGCGGGTCCAACAACTTCTCTGGTTCATTGCCATCTGAGCTTGGAAGTCTCTCGAAATTAGAACAATTGTACTTTGATAGTGCCAGACTAAGTGGCGAGATTCCTTCATCATTTGCTAATCTGAAGAGCTTGAAGACAGTATGGGCATCAGATAATGAGCTCACAGGCAAAATACCTGATTTCATAGGCAATTGGTCAAAACTTGTAACCTTGAGGTTTCAAGGGAACAATTTCAACGGTTCGATACCGTCCTCATTTTCCGATTTGACATCTCTCACCGAGTTGAGAATAAGCAGTTTGTCCAATTCAAGCTCTTCACTTACATTTATTCAAAACATGAAGTCTCTGACTGTCCTGGTACTGAGTAATAACAATATTTCTGATTCAATTCCATCTGATATTGGAGAATACCAACAATTGACCCAGCTGGATTTGAGCTTCAACGGTATAACCGGACAGATTCCAACTTCGCTTTTCAATCTGAGCTCACTGACTCACTTGTTTCTGGGAAATAATCAGTTGACTGGAACTCTGCCTACTGAAAAGAGTTCCACTCTTCTCAATATAGATTTATCCTACAATAATTTGTCAGGGAGTATTCCTTCTTGGGCCAGCCAACAAAGCTTACAACTTAATTTAGTCGCCAACAATTTTACTATAGACAGTTCGAATAACAGCGTATTGCCTTCCGGATTGAACTGTCTCCAGAAAAACTTTCCGTGCCATCGAGGTTCCGGAATCTACTATAACTTTGGAATTAAATGTGGGGGCCCCCAGATCAAGGGTTCTAGTGGGATTGTGTTTGAAATGGAAAATGAGACTCTTGGAGCAGCTACATATTTTGTTACAGATTCAGACAGGTGGGCCGTAAGTAATGTGGGGTACTTTACGGGCACAAACACTCAGATATACACGAGCTCTTCACAGTCTCAGTTTGCAAACACTCTAGACACAGAGCTGTTTCAATCAGCTCGTCTCTCTCCTTCATCACTTAGATACTATGGATTGGGTCTAGAAAATGGAAACTACACTGTCACCCTCCAGTTCGCCGAAACAGCTTTCGTTGATACAGAGTCATGGAAAAGTCTCGGAAGGCGTGTTTTCGATATTTATATCCAGGGTAATCTTGTTTTAAAAGATTTCGATATACGAAAAGAGGCAGGAGGGGTCTCTTTCCGTGCTGTTACAAAGCCATTTCCGGTTCTGGTTTCGGAAAATTACATGGAGATCCATCTCTTTTGGGCTGGAAAAGGAACCTGTTGCATTCCCGGTCAGGGAACTTATGGGCCTTCTATTTCAGCCATAAGTGCTACCCCGAATTTCACACCTACTGTTAGTAACAACCCTCCAAGCACTAAGAAGAATAGAACTGGTATTATTGTTGGAATTGTTGTTGGTGTGAGCGTTCTGAGTATTCTTGCCGTGTTCATACTTTTCTTTATCATGAAAAGAAGAAAAAGGCCTCGTTTCAATGAAAATGAAGAATTCTTAGGAATAGATGCAAAACCGTACACTTTCAGTTATGCCGAGCTAAGGAATGCTACAGAAGACTTTAACCTGGCAAATAAGCTTGGAGAAGGAGGATTTGGGCCGGTCTACAAGGGAAAACTGGAAGATGGGAGATTGATTGCTGTGAAGCAACTTTCGTTATCATCCCATCAGGGGAAAAACCAGTTTGTAACGGAAATTGCTACAATCTCAGCCGTCCAACACCGTAACCTCGTGAAATTATACGGATGCTGCATTGAAGTTGATAATCGGATGCTGGTTTATGAATATGTGAACAATGGCAACTTGGAACAATGGTTGCACGGAGCTATGCGCCAACATGGAACCCTGACTTGGGAGGCCCGCACAAAGGTGCTTCTTGGCACTGCGAAAGCGCTTGCATATTTACACGAAGCAATAGAGCCGAAAGTTGTTCATAGAGATATAAAGTCAAGTAACATCTTGATTGATGATGAGTTTAATGCCAAGGTTTCTGATTTTGGATTGGCAAAACTCTTGGACTCGGGTGAAAGTCATATCACAACTAGAGTGATGGGGACATTCGGTTACGTGGCACCCGAATATGCAAATACAGGTTTGTTAAATGAGAGGAGCGACATTTACAGCTTTGGTGTTCTCCTTCTGGAAGCAATCACAGGAAGAGACCCTGTGGACTATGGCCGACCGGCTGATGAGGTTAATCTTGTGGAGTGGCTTAAGGTGATGGTGGGGACGGGAAGAGCTGAGGAAGTTGTGGACCCAGAACTTGAAGTTAAACCGACTACACGGGCTTTAAAACGAGCCCTACTAGTTGCACTTAGGTGCATTGATCCTGAAGCAGGCAAGAGACCTAAAATGAGTCAAGTTGTTAGAATGCTTGAAGCTGATGAATATCCCACACGCGAGGATCGAAGAAATAGAAAGAGCCGAACAGCGAGCATGGAAATGGAATCGATGAAGGAAATTTCGGGCACTGGCGAGACGGAAAGCAAGCTGGGAGGTGGGGAGTCAGAGGTTCCTACTTGTGAGACACAACTCATTGATAGAAGCGCAACGGTCTAA 3090 43.5 MVGYSPPNILILPLFLHLCVFSSLVSVSQAQNQTQNATTDPAEAKALNSIFEVWNIKANTAQWNISGELCSGNAIDTATTIDDTTYNPFIKCDCSDNNGTTCHITALKVYAVDVVGVLPDELWTLTYLTNLNLAQNYLTGPVSASIGNLTRMQYLNIGINALSGELPKELGNLTNLVSIGCGSNNFSGSLPSELGSLSKLEQLYFDSARLSGEIPSSFANLKSLKTVWASDNELTGKIPDFIGNWSKLVTLRFQGNNFNGSIPSSFSDLTSLTELRISSLSNSSSSLTFIQNMKSLTVLVLSNNNISDSIPSDIGEYQQLTQLDLSFNGITGQIPTSLFNLSSLTHLFLGNNQLTGTLPTEKSSTLLNIDLSYNNLSGSIPSWASQQSLQLNLVANNFTIDSSNNSVLPSGLNCLQKNFPCHRGSGIYYNFGIKCGGPQIKGSSGIVFEMENETLGAATYFVTDSDRWAVSNVGYFTGTNTQIYTSSSQSQFANTLDTELFQSARLSPSSLRYYGLGLENGNYTVTLQFAETAFVDTESWKSLGRRVFDIYIQGNLVLKDFDIRKEAGGVSFRAVTKPFPVLVSENYMEIHLFWAGKGTCCIPGQGTYGPSISAISATPNFTPTVSNNPPSTKKNRTGIIVGIVVGVSVLSILAVFILFFIMKRRKRPRFNENEEFLGIDAKPYTFSYAELRNATEDFNLANKLGEGGFGPVYKGKLEDGRLIAVKQLSLSSHQGKNQFVTEIATISAVQHRNLVKLYGCCIEVDNRMLVYEYVNNGNLEQWLHGAMRQHGTLTWEARTKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNERSDIYSFGVLLLEAITGRDPVDYGRPADEVNLVEWLKVMVGTGRAEEVVDPELEVKPTTRALKRALLVALRCIDPEAGKRPKMSQVVRMLEADEYPTREDRRNRKSRTASMEMESMKEISGTGETESKLGGGESEVPTCETQLIDRSATV 1029
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11022006 11104334 - Conep10aG0146800.1 Cone10ag1425 447223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag1425 1029 FunFam Putative LRR receptor-like serine/threonine-protein kinase 283 406 - -
Cone10ag1425 1029 Gene3D - 429 619 - -
Cone10ag1425 1029 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 980 IPR051824 GO:0005886(PANTHER)
Cone10ag1425 1029 SUPERFAMILY L domain-like 96 398 - -
Cone10ag1425 1029 Gene3D Phosphorylase Kinase; domain 1 661 773 - -
Cone10ag1425 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag1425 1029 Gene3D Ribonuclease Inhibitor 283 407 IPR032675 -
Cone10ag1425 1029 Gene3D Ribonuclease Inhibitor 40 282 IPR032675 -
Cone10ag1425 1029 MobiDBLite consensus disorder prediction 973 991 - -
Cone10ag1425 1029 Pfam Malectin domain 431 615 IPR021720 -
Cone10ag1425 1029 FunFam Leucine-rich repeat receptor-like protein kinase 428 619 - -
Cone10ag1425 1029 Pfam Leucine Rich Repeat 366 383 IPR001611 GO:0005515(InterPro)
Cone10ag1425 1029 Pfam Leucine Rich Repeat 295 315 IPR001611 GO:0005515(InterPro)
Cone10ag1425 1029 Pfam Leucine Rich Repeat 223 245 IPR001611 GO:0005515(InterPro)
Cone10ag1425 1029 Pfam Leucine Rich Repeat 343 360 IPR001611 GO:0005515(InterPro)
Cone10ag1425 1029 Pfam Leucine Rich Repeat 319 341 IPR001611 GO:0005515(InterPro)
Cone10ag1425 1029 Pfam Leucine Rich Repeat 247 269 IPR001611 GO:0005515(InterPro)
Cone10ag1425 1029 CDD STKc_IRAK 704 970 - -
Cone10ag1425 1029 Gene3D Transferase(Phosphotransferase) domain 1 774 988 - -
Cone10ag1425 1029 FunFam Leucine-rich repeat transmembrane protein kinase 41 282 - -
Cone10ag1425 1029 FunFam Leucine-rich repeat receptor-like protein kinase 668 773 - -
Cone10ag1425 1029 FunFam Putative receptor-like serine/threonine-protein kinase 774 984 - -
Cone10ag1425 1029 MobiDBLite consensus disorder prediction 973 1029 - -
Cone10ag1425 1029 SUPERFAMILY Protein kinase-like (PK-like) 682 972 IPR011009 -
Cone10ag1425 1029 ProSiteProfiles Protein kinase domain profile. 698 956 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag1425 1029 SMART serkin_6 698 969 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag1425 1029 Pfam Protein kinase domain 699 967 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1425 Cone-Chr10:11022006 Cone3ag1487 Cone-Chr3:33526021 7.36E-179 dispersed
Cone9ag1434 Cone-Chr9:10665161 Cone10ag1425 Cone-Chr10:11022006 1.15E-70 dispersed
Cone9ag1435 Cone-Chr9:10668309 Cone10ag1425 Cone-Chr10:11022006 7.25E-74 dispersed
Cone10ag1425 Cone-Chr10:11022006 Cone5ag1634 Cone-Chr5:11537601 9.11E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81858 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag1425 - - - 0.0