Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag1448 | ATGTTCCATAATTCCTCCAAGAAACCAAGCTCGAGCACTAGTATGAATTCACATCATGAGAGGGCGAATATGAACATGTGCGTTCAAGCCGCCGACTCTGGCCTCGTCCTTACCACAGACCCTAAGCCTCGTCTCCGTTGGACGGTGGAGCTCCATGAACGCTTTGTTGATGCTGTCACTCAGCTTGGAGGCCCTGACAAGGCCACTCCAAAGACCATCATGAGGGTTATGGGTGTGAAGGGTCTTACTCTTTACCACCTCAAAAGCCACCTTCAGAAATTCAGGCTTGGAAAGCAACCTCATAAGGAATTCAATGATCACTCCATGAAGGAAGCTTCAGCTTTAGAACTTCAACGAAACAATGCAGCTTCGTCTGGAATGCTAGGCCGCAGTATGAATGAGATGCAAATGGAGGTGCAAAGAAGGCTGCATGAACAATTAGAGGTACAGAGACATCTTCAGTTGAGGATAGAAGCTCAAGGGAAGTACATGCAAAGCATATTGGAGAAGGCTTGTCAAACTCTTGCCGGGGAAAGCAATAACAACAACATTAATTCCGGAGTAGGGGCCTTTAACATGAATTCTCATCAATCTCTTATCAGCCTGCCACCTAATTTCCAAGATATTGATATTAATGCATACGGAGGGGATCATCATCATCATCATCAACTAATTCTTGACCATCTTCAACAGCCCGATGGTGGTGGTGGCGGCGGCGGAAAGAGCTGCAGCCCAGGCTTAGTTTGGTCTGAGCAAATGTACGATCAGCTGGGACCCGGCCAAGAAGAGACTTTCAAGACCTTGCAGCCACATGACCAGAATCATCATGAGATGGATATGTATGAAACAAAGCTAGGACTGTCAGGAGGTCATCATCATGCAGCAGCCATGGCCGAAAAGAAGTTATTTGATGCGCCGGCGACAGGCCTAAAGCATGAAAGGTCAATGATGATGTCATCACCCAGAAGGTCACCACTTCATTCAGCTGATCATAGGATCAACTATATCACCAACACCAACAATAATAGTAATAACAATGGGTCAATACAGCAGTACTAG | 1059 | 46.27 | MFHNSSKKPSSSTSMNSHHERANMNMCVQAADSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSMKEASALELQRNNAASSGMLGRSMNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLAGESNNNNINSGVGAFNMNSHQSLISLPPNFQDIDINAYGGDHHHHHQLILDHLQQPDGGGGGGGKSCSPGLVWSEQMYDQLGPGQEETFKTLQPHDQNHHEMDMYETKLGLSGGHHHAAAMAEKKLFDAPATGLKHERSMMMSSPRRSPLHSADHRINYITNTNNNSNNNGSIQQY | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 11222271 | 11224673 | + | Conep10aG0149200.1 | Cone10ag1448 | 447246 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag1448 | 352 | Pfam | MYB-CC type transfactor, LHEQLE motif | 135 | 174 | IPR025756 | - | |
Cone10ag1448 | 352 | FunFam | Myb family transcription factor | 41 | 99 | - | - | |
Cone10ag1448 | 352 | SUPERFAMILY | Homeodomain-like | 41 | 97 | IPR009057 | - | |
Cone10ag1448 | 352 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 42 | 97 | IPR006447 | GO:0003677(InterPro) | |
Cone10ag1448 | 352 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 39 | 99 | IPR017930 | - | |
Cone10ag1448 | 352 | Pfam | Myb-like DNA-binding domain | 44 | 94 | IPR001005 | - | |
Cone10ag1448 | 352 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 16 | 209 | IPR046955 | GO:0003700(InterPro) | |
Cone10ag1448 | 352 | Gene3D | - | 41 | 99 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag1448 | Cone-Chr10:11222271 | Cone4ag0401 | Cone-Chr4:1822889 | 1.75E-47 | dispersed | |
Cone10ag1448 | Cone-Chr10:11222271 | Cone3ag1514 | Cone-Chr3:33669386 | 1.22E-202 | wgd | |
Cone10ag1448 | Cone-Chr10:11222271 | Cone8ag1607 | Cone-Chr8:11908305 | 8.66E-83 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44270 | PF00225 | Kinesin | 3.20E-92 | CL0023 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag1448 | - | - | - | 0.0 |