Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0021 ATGGCTCTCCCTGAAAACACCGCTCGTCACTCTCTCATCCCTAACTTTCTTTATTCCTCTTCTTTCTCCACCAAAACCCCGGGCCTTGACAAAATGGTCCAGGCCTCCCCTGCCGCCTTTGAATCTGTATCGCCATCCACCAAGAGCTTCGTCATTCCTGCCCCCACCGAGCCTAGCAGGAAGATTGAGCTGTACTCCCCCGCCTTCTACGGCGCCTGTACCGTTGGTGGAATTCTCAGCTGTGGTCTCACACACATGGCCGTCACCCCTCTCGATCTTGTCAAATGCAATATGCAGATCGACCCTGCAAAATACAAAAGCATTTCATCTGGTTTTGGAGTCTTGCTCAAGGAACAGGGTGTCAAAGGTTTCTTCAGGGGTTGGGTCCCTACCCTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTTTACGAATTCTTCAAAAAGTATTACTCTGATATTGCTGGACCAGAGTATGCAACCAAGTACAAGACCTTGATCTATCTTGCTGGTTCTGCATCTGCTGAGGTGATTGCAGATATTGCACTTTGCCCCTTTGAAGCTGTGAAAGTCCGAGTTCAAACCCAACCTGGTTTTGCCAGAGGACTTTCAGATGGCCTTCCCAAGTTTGTCAGATCTGAGGGAGTTCTTGGGTTGTACAAGGGTCTTGTTCCTCTATGGGGACGTCAGATTCCATATACTATGATGAAATTTGCATCCTTTGAGATGATTGTTGAAAACATCTATAAGCATGCCATTCCAAAACCAAAGGACCAGTGTAGCAAACAGCTGCAGCTTGGCGTCAGTTTTGCTGGTGGATATGTGGCTGGCATTTTCTGTGCCATTGTGTCTCATCCTGCAGACAATCTTGTCTCTTTTCTGAACAATGCCAAGGGGGCGACTGTTGGCGATGCTGTGAAAAAGATTGGGTTAGTGGGTTTGTTCACCCGTGGGCTGCCTCTCCGTATTGTCATGATTGGAACACTCACTGGAGCACAATGGGGAATCTATGATGCATTCAAAGTCTTCGTGGGATTGCCAACCACGGGAGGTGCTGTACCTGCTGCCGCAGCTGCAGAGCTGGTAGCAAAGGCCTAA 1104 48.91 MALPENTARHSLIPNFLYSSSFSTKTPGLDKMVQASPAAFESVSPSTKSFVIPAPTEPSRKIELYSPAFYGACTVGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYATKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGVLGLYKGLVPLWGRQIPYTMMKFASFEMIVENIYKHAIPKPKDQCSKQLQLGVSFAGGYVAGIFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGLVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAVPAAAAAELVAKA 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 128661 130854 + Conep11aG0002200.1 Cone11ag0021 447273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0021 367 Gene3D Mitochondrial carrier domain 72 345 IPR023395 -
Cone11ag0021 367 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 47 354 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Cone11ag0021 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 68 152 IPR018108 -
Cone11ag0021 367 FunFam Phosphate carrier protein, mitochondrial 68 346 - -
Cone11ag0021 367 Pfam Mitochondrial carrier protein 166 252 IPR018108 -
Cone11ag0021 367 Pfam Mitochondrial carrier protein 71 155 IPR018108 -
Cone11ag0021 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 266 345 IPR018108 -
Cone11ag0021 367 SUPERFAMILY Mitochondrial carrier 73 341 IPR023395 -
Cone11ag0021 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 249 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0021 Cone-Chr11:128661 Cone19ag0236 Cone-Chr19:1548657 9.07E-193 dispersed
Cone10ag1210 Cone-Chr10:8978939 Cone11ag0021 Cone-Chr11:128661 5.85E-113 transposed
Cone11ag0021 Cone-Chr11:128661 Cone18ag1459 Cone-Chr18:9772843 6.46E-243 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0021 K15102 - csv:101221771 605.52