Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0022 ATGGCCACCAGATACTGGATTGTGTCTCTCCCGGTGCAAGGTTCTGCATCATCTTTGTGGAATGCTCTTCAAGAGAGAATCTCCAAGAATTCCTTCGATACTCCTCTCTACAGATTCAATATACCTAATCTCCGCGTGGGAACCCTCGATTCCCTCCTTTCACTCAGCGACGATCTTCTAAAGTCGAACATCTTCGTGGAGGGAGTCTCTCACAAGATCAGACGACAGATTGAGGAGTTGGAGCGAGCTTCAGGCGTAGTTAGCAGCGGGCTAACTGTGGATGGAGTGCCTGTTGATTCGTACCTAACAAGGTTTGTTTGGGATGAAGCCAAGTACCCTACAATGTCACCCTTGCGGGAAATTGTGGACAACATTCATAGTCTTGTGGCAAAGATTGAGGACGATCTCAAGGTTCGTGTTGCTGAGTACAACAATGTTAGAAGTCAGCTGAATGCTATCAACAGAAAGCAAAGTGGAAGCTTAGCAGTTCGTGATCTTTCCAACCTCGTGAAACCAGAAGATATAATTACCTCAGAGCATCTCGTAACCCTTCTTGCGGTTGTTCCCAAGTACTCTCAGAAGGATTGGCTGTCTAGCTATGAAACATTTACTAGCTATGTGGTCCCAAGGTCTTCCAAGAAGTTGCATGAGGATAATGAGTATGCTTTATATACTGTAACCTTATTTGGCCGTGTTGCAGATAATTTTAGAACAAGCGCTCGTGAGAGAGGGTTTCAGATCCGTGATTTCGAACATAGTTCAGATGCACAAGAGGGTAGGAAGCAGGAGTTGGAAAAATTGGTTCAGGATCAAGAAAATTTGAGAAGCTCTCTTCTGCAATGGTGTTATACTAGTTATGGCGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCTGTACGTATTTTTGCTGAGAGCATACTAAGATATGGTTTACCACCATCTTTCTTGGCGGCTGTTTTAGCCCCATCATTGAAAAGTGAGAAGAAGGTGAGATCAATCCTTGAAGGTTTGTGCGAGACAGCAAACAGCACATACTGGAAAACAGAAGATGAAGTGGGAGGAGGGATGGCTGGTTTAGCAGGGGATTCAGATGCCCATCCATATGTTTCTTTCACAATCAACCTTATTTAA 1131 44.39 MATRYWIVSLPVQGSASSLWNALQERISKNSFDTPLYRFNIPNLRVGTLDSLLSLSDDLLKSNIFVEGVSHKIRRQIEELERASGVVSSGLTVDGVPVDSYLTRFVWDEAKYPTMSPLREIVDNIHSLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLSSYETFTSYVVPRSSKKLHEDNEYALYTVTLFGRVADNFRTSARERGFQIRDFEHSSDAQEGRKQELEKLVQDQENLRSSLLQWCYTSYGEVFSSWMHFCAVRIFAESILRYGLPPSFLAAVLAPSLKSEKKVRSILEGLCETANSTYWKTEDEVGGGMAGLAGDSDAHPYVSFTINLI 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 131505 134941 - Conep11aG0002300.1 Cone11ag0022 447274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0022 376 Gene3D Vacuolar atp synthase subunit c; domain 1 6 334 - -
Cone11ag0022 376 SUPERFAMILY Vacuolar ATP synthase subunit C 1 375 IPR036132 GO:0015078(InterPro)|GO:0033180(InterPro)|GO:1902600(InterPro)
Cone11ag0022 376 Coils Coil 254 274 - -
Cone11ag0022 376 CDD V-ATPase_C 5 373 IPR004907 GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cone11ag0022 376 Gene3D - 163 251 - -
Cone11ag0022 376 Pfam V-ATPase subunit C 5 369 IPR004907 GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cone11ag0022 376 Gene3D - 41 312 - -
Cone11ag0022 376 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 375 IPR004907 GO:0000221(PANTHER)|GO:0033180(InterPro)|GO:0046961(InterPro)|GO:0046961(PANTHER)|GO:1902600(InterPro)
Cone11ag0022 376 FunFam V-type proton ATPase subunit C 163 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0022 Cone-Chr11:131505 Cone18ag1458 Cone-Chr18:9769268 8.49E-262 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0022 K02148 - mdm:103404142 661.759