Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0095 ATGGTGATAGTAACAGAGCTTCTATCGGGTGGGACATTACGTAAATACTTGTTGAACATGCGTCCGAATCGGTTGGATGTTCACCTTGCAATCAGATTTGCACTCGATATTGCTCGAGCAATGGAGTGCTTACATTCTCACGGGATCATTCACCGTGACCTTAAACCAGAGAACTTGATCTTGACAGGTGACCATAAAACAGTTAAACTTGCGGATTTTGGTTTGGCAAGGGAAGAGTCGGTCACAGAGATGATGACTGCCGAAACAGGGACATATCGTTGGATGGCTCCAGAGCTTTACAGTACGGTTACCCTTAAACATGGAGAGAAGAAGCATTACAATCACAAGGTGGATGCCTACAGCTTCGCCATTGTATTGTGGGAGCTCATCCATAACAAGTTGCCTTTCGAAGGCATGTCCAATCTACAGGTTGCATATGCTGCTGCTTTTAAGAACATGAGGCCTACAGCAGAGAACCTTCCCGAAGATTTGGCTTCGATCGTGACATCATGTTGGAAAGAGGATCCAAACGCTCGGCCAAACTTCACTCAGATTATACAAATGCTTTTGCAGTATCTCTCTTCAGTTACGCCATGTCAACCGGTTATTCCACCTAGGATTCATTCTTCAGAAAATGTCGTCTTCCCACCAGAATCACCCGGTGCGAGTTCCTTGATGGCTAAAAGGGATAACTCGGGAGAGAACCCTAATAGCACCACCGAAGACCGATCGAAAAGTTTGTTTTTTTGCTTTAACAAATGTTACTGA 768 44.79 MVIVTELLSGGTLRKYLLNMRPNRLDVHLAIRFALDIARAMECLHSHGIIHRDLKPENLILTGDHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLKHGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQVAYAAAFKNMRPTAENLPEDLASIVTSCWKEDPNARPNFTQIIQMLLQYLSSVTPCQPVIPPRIHSSENVVFPPESPGASSLMAKRDNSGENPNSTTEDRSKSLFFCFNKCY 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 406377 408820 - Conep11aG0009600.1 Cone11ag0095 447347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0095 255 SUPERFAMILY Protein kinase-like (PK-like) 2 214 IPR011009 -
Cone11ag0095 255 CDD STKc_MAP3K-like 3 189 - -
Cone11ag0095 255 Gene3D Transferase(Phosphotransferase) domain 1 1 197 - -
Cone11ag0095 255 Pfam Protein tyrosine and serine/threonine kinase 2 189 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0095 255 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0095 255 PRINTS Tyrosine kinase catalytic domain signature 5 18 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0095 255 PRINTS Tyrosine kinase catalytic domain signature 160 182 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0095 255 PRINTS Tyrosine kinase catalytic domain signature 117 139 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0095 255 PRINTS Tyrosine kinase catalytic domain signature 43 61 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0095 255 MobiDBLite consensus disorder prediction 213 242 - -
Cone11ag0095 255 SMART serkin_6 1 193 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0095 255 MobiDBLite consensus disorder prediction 225 242 - -
Cone11ag0095 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 49 61 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0095 255 FunFam serine/threonine-protein kinase HT1 10 209 - -
Cone11ag0095 255 PANTHER SERINE-THREONINE PROTEIN KINASE 2 191 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0095 Cone-Chr11:406377 Cone3ag0473 Cone-Chr3:2302328 1.31E-100 dispersed
Cone11ag0095 Cone-Chr11:406377 Cone13ag0169 Cone-Chr13:1053186 1.75E-144 wgd
Cone11ag0095 Cone-Chr11:406377 Cone18ag1380 Cone-Chr18:9463826 5.84E-177 wgd
Cone11ag0095 Cone-Chr11:406377 Cone19ag0166 Cone-Chr19:953893 1.93E-141 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81860 PF09273 Rubis-subs-bind 6.40E-23 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0095 - - - 0.0