Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0097 ATGGAGTCACTTGTTGATGGTGTGAAATCCTTAGCCAAAGCTCCTCCCACATCTGAGCTTTCTCCCTCTTCTAGACATCCTTCTCCAAAAAAACCTCGAGACCAATCTACTTCTTCATCTTCTCAGTCTATCGGCACGAAACTAGCCGAATATTCAAATGGTTCCGTGATTCATCATCATCAAAAGAAGCATTCTGACAGATGGCCTCATGATAATAAATCAGAGGTCGAAGACCTACATAAATCAACTAAGGAGAAATCAGCCCTACCTTCTTCACTAAAGAAGGATTGTAGTTCAAGTGGATTGCAAGAATCTCAAGCTATGCAAATGAACAGCCAATTAACATCTCAGTTGATAGTGAATTCTTGCACAAGTTCTCAGAACAGTTTATACTCTGCAACTGTGTATTCAGAAGCAAAACAGAGCTTTACAAATACAGAAGTGAGTGAATGTACAAGCAGCATTGATAAGTCTCATGAAAGCAGTGATTTTGTTAACAAGAGTAGGAAAAACAGTGTTTACAGAGAAAGCACGGGTAGTGATTTGAGTGATGAGAGCAATTCAAGTAGTTTGAGCGGTACAACTTATAAGCCCCATAAGGCGAATGATACGAGATGGGAAGCGATTCAGGTCGTCCGATCCAGAGAAGGGATGTTAGGAGTGAATAATTTCAGGTTATTCAGAAGACTTGGTTGTGGAGACATTGGGAGTGTTCATCTTGCTGAGTTGACTGGTACGAGAACTTTCTTTGCTATGAAAGTTATGGATAAAGCTGCTCTGGCTAGTAGGAAGAAGCTTTTAAGAGCTCAGACTGAAAGAGAGATATTGCAATGTTTGGATCATCCCTTTTTGCCCACTTTGTACGCTCATTTTGAAACGGAGAAGTTCGCTTTCTTGGTTATGGAGTTTTGCCCAGGTGGGGACTTGCATTCTTTAAGGCAAAGACAACCTGGAAAGTTTTTTCCAGAGCATGCTGCCAGGTTTTATGTGGCTGAAGTTCTTCTTGCTTTGGAATATCTACACATGCTTGGAATCATATATAGAGACCTGAAACCAGAGAATGTGTTAGTGAGAGAAGATGGTCACATAATGCTTTCCGATTTCGACCTCTCTCTAAGATGTGCAGTTTCACCAACTCTAGTCCGATCGTCAATCTCTAGTTTGGAGTCAAAGAGTTCAGCTTACTGTGTCCAACCCGCTTGCATTGAGCCGAGTTGTGTAATGCAGCCGGCTTGCATTCAACCTTCATGTTTTGCCCCTCACTTCTTATCAAACAAACCCAAAAAAGACAAAAAGGGTAGTAGTAGTACTACTACTAATAGTAGTAAACCGAAAAACGATGTACATCATCAAGTGAGTCCTCTTCCTGAGCTCCTAGCAGAACCCACAAGTGCTCGGTCCATGTCATTTGTCGGGACCCACGAGTACTTGGCTCCAGAAATCATAAAAGGCAAAGGGCATGGCAGTGCGGTTGATTGGTGGACTTTTGGGGTCTTTCTATACGAGCTCTTGTTTGGAAAAACTCCGTTCAAAGGGAACGGAAACAGGGCTACACTGTTTAACGTGGTGGGCCAGCCCTTGAGATTTCCTGAAAATCCTTCTGTTAGCTTTGCGGCAAGGGATTTGATCAGAGGCTTACTAGTGAAAGAGCCACAGCATCGTCTGGCCTATAGACGAGGAGCTACAGAGGTTAAACAGCATCCCTTTTTTCAAAGCATTAACTGGGCTCTGATCCGTTGTGCTAATCCACCTGAGATACCGAAAGTAGAGGTGATGAACTTCCCTTCGAAAAGTGGGAACCCACAATCGCCAACGGCCGAGAACATGTATGGAGTTGATGTCAAGCCTTCGGGTAATTATTTAGAGATCGACTTCTTTTGA 1881 42.96 MESLVDGVKSLAKAPPTSELSPSSRHPSPKKPRDQSTSSSSQSIGTKLAEYSNGSVIHHHQKKHSDRWPHDNKSEVEDLHKSTKEKSALPSSLKKDCSSSGLQESQAMQMNSQLTSQLIVNSCTSSQNSLYSATVYSEAKQSFTNTEVSECTSSIDKSHESSDFVNKSRKNSVYRESTGSDLSDESNSSSLSGTTYKPHKANDTRWEAIQVVRSREGMLGVNNFRLFRRLGCGDIGSVHLAELTGTRTFFAMKVMDKAALASRKKLLRAQTEREILQCLDHPFLPTLYAHFETEKFAFLVMEFCPGGDLHSLRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVRSSISSLESKSSAYCVQPACIEPSCVMQPACIQPSCFAPHFLSNKPKKDKKGSSSTTTNSSKPKNDVHHQVSPLPELLAEPTSARSMSFVGTHEYLAPEIIKGKGHGSAVDWWTFGVFLYELLFGKTPFKGNGNRATLFNVVGQPLRFPENPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKQHPFFQSINWALIRCANPPEIPKVEVMNFPSKSGNPQSPTAENMYGVDVKPSGNYLEIDFF 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 411823 414544 - Conep11aG0009800.1 Cone11ag0097 447349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0097 626 MobiDBLite consensus disorder prediction 171 199 - -
Cone11ag0097 626 PANTHER FLIPPASE KINASE 1-RELATED 91 592 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone11ag0097 626 MobiDBLite consensus disorder prediction 92 109 - -
Cone11ag0097 626 MobiDBLite consensus disorder prediction 67 91 - -
Cone11ag0097 626 CDD STKc_phototropin_like 224 589 - -
Cone11ag0097 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0097 626 MobiDBLite consensus disorder prediction 1 109 - -
Cone11ag0097 626 FunFam Serine/threonine-protein kinase D6PK-like 222 307 - -
Cone11ag0097 626 MobiDBLite consensus disorder prediction 426 453 - -
Cone11ag0097 626 SMART serkin_6 224 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0097 626 MobiDBLite consensus disorder prediction 154 199 - -
Cone11ag0097 626 MobiDBLite consensus disorder prediction 33 50 - -
Cone11ag0097 626 SUPERFAMILY Protein kinase-like (PK-like) 199 606 IPR011009 -
Cone11ag0097 626 FunFam serine/threonine-protein kinase D6PK-like 308 375 - -
Cone11ag0097 626 Pfam Protein kinase domain 467 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0097 626 Pfam Protein kinase domain 226 375 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0097 626 MobiDBLite consensus disorder prediction 434 448 - -
Cone11ag0097 626 Gene3D Transferase(Phosphotransferase) domain 1 465 588 - -
Cone11ag0097 626 Gene3D Phosphorylase Kinase; domain 1 222 307 - -
Cone11ag0097 626 Gene3D Transferase(Phosphotransferase) domain 1 308 375 - -
Cone11ag0097 626 ProSiteProfiles Protein kinase domain profile. 224 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0097 626 MobiDBLite consensus disorder prediction 154 170 - -
Cone11ag0097 626 FunFam serine/threonine-protein kinase D6PK-like 465 588 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0097 Cone-Chr11:411823 Cone5ag1793 Cone-Chr5:12725115 2.15E-229 dispersed
Cone11ag0097 Cone-Chr11:411823 Cone16ag0254 Cone-Chr16:2793920 1.71E-49 wgd
Cone11ag0097 Cone-Chr11:411823 Cone18ag1379 Cone-Chr18:9457845 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81861 PF01269 Fibrillarin 2.60E-108 CL0063 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0097 K08286 - csv:101219962 847.04