Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0106 ATGATGCAGAGCACCGCGCTAGCTCTGATTCCGAAACCTCCATATACTAACCTTAATCCGAACCTTAAGCTCATTCAATATTCGCAGTTCTTGTCTTCTTCAACTACATTCAAGCTCGGTTCCTATCGTGGAGTATTCTCATGGAAAACACTTCCGGACATATTTTCCTCCTCTTCGATTTTCTCCGATTCACTTTCGATATCGGGCTGGAGGTTGGAGAAATTCAAGGTTAAAGCTTCTTCCGTACCGGAAAACGTGGATGAGGCTTCTGAGAACGCTACCGGCGTGGTTCGGAGTCTGCAACTTGGAGCTATGTTCGGAATTTGGTACCTCTTGAATATTTACTTCAACATTTACAACAAACAGGTACTGAAAGTATATCCATTTCCAGCAATAGTCTCAGCTTTTCAGTTTGGTTGTGGAGCTGTGATTATCACCTTAATGTGGACATTTAATTTTTATCCCAGGCCTAAGATCAGTCGGTCTCAGCTTGTAGCAATCCTACCATTGGCCATAGCACATACAATGGGCAATCTCTTGACTAATATTAGCATTGGAAAAGTTGCTGTTTCCTTTACCCACACAATCAAAGCTATGGAGCCCTTTTTCACAGTCATCCTTGCTACCTTGTTTCTTTCTGAGAGGCCTAGTGTATGGGTGGTTTCTTCCCTTGCACCTATAGTTGGTGGAGTGTCTCTTGCAGCTTTCACTGAGCCCTCTTTTAATTGGATTGGCTTCTGTAGTGCAATGGCTTCCAATCTTACAAATCAGTCGAGAAATGTGTTTAGCAAAAAGTTTATGCGTAGGAAAGAGGACGCGTTGGACAATATCAACCTCTTCTCAGTAATAACCATCATTTCTTTTATCCTGTTGGTTCCCACCGCCATTCTTATGGAAGGTGCAAAGTTTTATCCCTTGTACCTAGAATCAGCTGCAAGCCAAGGAACGAATATTAGAAAGCTTTGTGTGAGACTACTCTTGTCTGGCATCTGCTTACATAGTTACCAACAGGTTTCTTATTCAATTCTACAGATGGTTTCACCAGTGACTCATGCAGTAGGAAACTGTGTGAAGCGGGTGGTAATTATAGTCTCCTCAGTTGTCTTCTTCCAAAGTGCTGTCTCACCTGTTAACGCCATCGGAACTGCCTTGGCTCTGGCCGGAGTTTTCCTGTATTCAAGAGCAAAGCGAATGAAATCGAAAACCAATCATTCATGA 1218 42.78 MMQSTALALIPKPPYTNLNPNLKLIQYSQFLSSSTTFKLGSYRGVFSWKTLPDIFSSSSIFSDSLSISGWRLEKFKVKASSVPENVDEASENATGVVRSLQLGAMFGIWYLLNIYFNIYNKQVLKVYPFPAIVSAFQFGCGAVIITLMWTFNFYPRPKISRSQLVAILPLAIAHTMGNLLTNISIGKVAVSFTHTIKAMEPFFTVILATLFLSERPSVWVVSSLAPIVGGVSLAAFTEPSFNWIGFCSAMASNLTNQSRNVFSKKFMRRKEDALDNINLFSVITIISFILLVPTAILMEGAKFYPLYLESAASQGTNIRKLCVRLLLSGICLHSYQQVSYSILQMVSPVTHAVGNCVKRVVIIVSSVVFFQSAVSPVNAIGTALALAGVFLYSRAKRMKSKTNHS 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 463083 466227 + Conep11aG0010700.1 Cone11ag0106 447358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0106 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 317 398 - -
Cone11ag0106 405 Pfam Triose-phosphate Transporter family 100 393 IPR004853 -
Cone11ag0106 405 PANTHER SOLUTE CARRIER FAMILY 35 98 396 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cone11ag0106 405 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 100 401 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone11ag0106 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0106 Cone-Chr11:463083 Cone2ag0910 Cone-Chr2:34906514 2.59E-140 dispersed
Cone11ag0106 Cone-Chr11:463083 Cone13ag0145 Cone-Chr13:911231 4.63E-144 wgd
Cone11ag0106 Cone-Chr11:463083 Cone19ag0142 Cone-Chr19:787906 1.88E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0106 K15283 - mdm:103442235 512.301