Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0132 ATGGATTTATCTCCTCGATTTAGCAGTGGGTTGGAACTGGCCAATTTTGCAGTAACATCTGATATTCTCCTGCATTCATGGGCTGCAATCAAGAACTTAACCAATTCAAATAGGTTACAGTCTTTACCTTTCTCTGTTAGATATAACTCTTATGATGATATTCGAAGAAAGTGTAAAATCATAGCATTTGAAGTTTCACTCAATTGCACTGAAGAATTCCTTGAAGGAAATGGAGATTTAGAATCACCAGCTACTACCCATAAGCAGATCTTCGAGTTTCTTTGCTCGAAAAGTAACCCGGAATTCTCCATCAACAAAGCTCTTCTTACCCTCTTCCACTCTTTCTATGAGGAGCATCAAAATGAGATTTCAGAGCTGATTGGTAAGACCACCACCCCATTAATCATAACTGGACATTGTTTAGGAGGATCCATTGCTTCACTCTTCACTCTGTGGCTTCTAGATCGGACTGATCTAACGACCAAAAACCGCCCACTTTGCATCACTTTTGGTTCACCTCTACTTGGAAATTCCGGCCTCAGAGAAGGCATTTTACAATACCCGACATGGAACTCTTGCTTCCTCCATGTAGTAGCTAACAATGACCCTCTACCTAGACTTTTCCTCTATCAATCTCCCTCTCTTTACACACCTTTCGGGACTTTCCTCTTCTGTTCCGAATCAGGTTCTGCTTGTTATGACCTTCCTCAATCTATTACCGAATTGTTGAAATTAACCCACAAGCGGGAAGCTGAAAATAGAGACCTTAATCAAGGCCTCTGGAACTTTGACTATGAAAGTATATTGCAAGAATTGAAACGCAGTGCAATCTATAAAGCTGTCATAGACATTGGAAGAAGCGATAAAGATGCATTACATGCTAGCTTTATGGCAGAACTACAAGCTATAGGAGTTGTTGTAGAAGAACAGTTGCAGCAACAGAACATGAACATTAACGGAATGATTGGAAGATTCCAGAAAGAGTTGAAGGACTCAGTTTTGGGGAAAATGAAGGTTTTCGATCCATCGGAGAAGTTGAATGAAAGAAAGAAGATTATGGCTCAACTCGAATGGTACAAGAAGGTTTGTAAGAAAGAGAAGTTAGGATACTATGACAGTTACAAGTATAGAAGAAATAAGAGGGACCTTAGAGTAACAGAGTTAAAGAAAGAACTAACAATTTACTGGGAAAAATTGGTCAAAGAAGTAGAGAACAAGCCTCAAAAGGAAGGGGTCTCTTTACGGACCCGTTGGCTGCTAGCCGGGTTGAATTATAGAAGGATGGTTGAACCACTTGACATAGCTGAATACTACCATGAAAAAAAAAGAAACTACTTAACAAGAGGGAGATCATATCATTATATAAAGCTGGAAGAATGGCATAGGCTAGAGAAAGAGAAGAAAAGGCAGGAAGTAAACTCAAGGAATGATAAGAGGAACGATGTTACTTCGATCTTGACGGAAGATTCTTGCTTTTGGGTGTATGTTGAAGAGGCTTTAATTGAGTGTGAGGTTCTGAGGAGTAATGAAGTAAATGCTGAGAAGAAAGAGTTGTCCAGAAATGAGCTGAATAAGTTTGAGAAGTATGTGATGGGTTTGATACAGGATTACGCAGTGTCTCCTGAAATTTTCTTGCCAAACTGCAGTTTTATGAGGTGGTGGGAAGACTATAATAAGATTATGGGAAGCTCCTATAACTCGGATCTAACCGAGTTAATGAGGACCGGAAAGTATAAAAATTATGCTGAGGGGTACCTAGATTGA 1764 39.57 MDLSPRFSSGLELANFAVTSDILLHSWAAIKNLTNSNRLQSLPFSVRYNSYDDIRRKCKIIAFEVSLNCTEEFLEGNGDLESPATTHKQIFEFLCSKSNPEFSINKALLTLFHSFYEEHQNEISELIGKTTTPLIITGHCLGGSIASLFTLWLLDRTDLTTKNRPLCITFGSPLLGNSGLREGILQYPTWNSCFLHVVANNDPLPRLFLYQSPSLYTPFGTFLFCSESGSACYDLPQSITELLKLTHKREAENRDLNQGLWNFDYESILQELKRSAIYKAVIDIGRSDKDALHASFMAELQAIGVVVEEQLQQQNMNINGMIGRFQKELKDSVLGKMKVFDPSEKLNERKKIMAQLEWYKKVCKKEKLGYYDSYKYRRNKRDLRVTELKKELTIYWEKLVKEVENKPQKEGVSLRTRWLLAGLNYRRMVEPLDIAEYYHEKKRNYLTRGRSYHYIKLEEWHRLEKEKKRQEVNSRNDKRNDVTSILTEDSCFWVYVEEALIECEVLRSNEVNAEKKELSRNELNKFEKYVMGLIQDYAVSPEIFLPNCSFMRWWEDYNKIMGSSYNSDLTELMRTGKYKNYAEGYLD 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 595732 597767 + Conep11aG0013500.1 Cone11ag0132 447384

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0132 587 PANTHER SENESCENCE-ASSOCIATED CARBOXYLESTERASE 101 3 584 IPR044603 GO:0006952(InterPro)|GO:0052689(InterPro)
Cone11ag0132 587 SUPERFAMILY alpha/beta-Hydrolases 113 229 IPR029058 -
Cone11ag0132 587 Gene3D alpha/beta hydrolase 16 270 IPR029058 -
Cone11ag0132 587 Pfam Enhanced disease susceptibility 1 protein EP domain 354 571 IPR041266 -
Cone11ag0132 587 Pfam Lipase (class 3) 97 209 IPR002921 GO:0006629(InterPro)
Cone11ag0132 587 Coils Coil 496 516 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0132 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0132 Cone-Chr11:595732 Cone18ag1350 Cone-Chr18:9296925 7.19E-19 dispersed
Cone11ag0132 Cone-Chr11:595732 Cone13ag0112 Cone-Chr13:679472 1.00E-24 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g134 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone11ag0132 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010846 0 1 0 0 0 1 1 2 1 1 2 2 1 1 1 1 2 1 1 1 1 1 1 2 2 1 1 2 1 0 32