Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0133 ATGGGTGGAGGAACTGAAGCTTTTCCTGATTTGGGGAAACACTGCCAACATTCAGATTGCAATCAGCTTGATTTTCTCCCTTTCAGCTGCGATGGCTGCCAAAAGGTATTTTGTGTAGAACACAGATTTCAAAAATCCCACGAGTGTCCGAAACCCGACAAAAACAGCAGAAAAGTTGTGGTGTGTGAAATCTGTTCAACCTCAATAGAGACAACCGGGAAAGACGAGGAAGATGAGAAGGTTTTAATGGAAAAGCATGAGAGATCTGGAAATTGCGATCCTAAGAAGAAGAAGAAGCCGGTCTGCCCTGTCAAGCGGTGCAAGGAGGTTCTGACCTTTTCCAATTCATGTACCTGCAAGACTTGCTGGTTGACGGTTTGTTTGAAACACCGGTTTCCGGAAGAGCATAGCTGCCAGAAGGGGTCCGGGGCAGCGGCCGTGGCAGCAGTGGCGGCAGTGAATAGGAGGTGGAATGATATGTTCTTGGTTGCTTTGTCATCAAGGAACGGAAAGGATTGTGGAATGAAGGAAAGGAATCCCAAGTCTCCTACAAGCAGTACTGCTTCTTCTGTCAAGGCCTTCTGA 585 47.35 MGGGTEAFPDLGKHCQHSDCNQLDFLPFSCDGCQKVFCVEHRFQKSHECPKPDKNSRKVVVCEICSTSIETTGKDEEDEKVLMEKHERSGNCDPKKKKKPVCPVKRCKEVLTFSNSCTCKTCWLTVCLKHRFPEEHSCQKGSGAAAVAAVAAVNRRWNDMFLVALSSRNGKDCGMKERNPKSPTSSTASSVKAF 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 598956 599814 + Conep11aG0013600.1 Cone11ag0133 447385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0133 194 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270(InterPro)
Cone11ag0133 194 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270(InterPro)
Cone11ag0133 194 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270(InterPro)
Cone11ag0133 194 Gene3D - 75 156 IPR035896 -
Cone11ag0133 194 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 178 - GO:0005737(PANTHER)
Cone11ag0133 194 SUPERFAMILY AN1-like Zinc finger 62 144 IPR035896 -
Cone11ag0133 194 MobiDBLite consensus disorder prediction 172 194 - -
Cone11ag0133 194 SUPERFAMILY AN1-like Zinc finger 5 59 IPR035896 -
Cone11ag0133 194 Pfam AN1-like Zinc finger 15 53 IPR000058 GO:0008270(InterPro)
Cone11ag0133 194 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270(InterPro)
Cone11ag0133 194 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270(InterPro)
Cone11ag0133 194 Gene3D - 2 68 IPR035896 -
Cone11ag0133 194 MobiDBLite consensus disorder prediction 179 194 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0133 Cone-Chr11:598956 Cone19ag0521 Cone-Chr19:4281234 9.54E-41 dispersed
Cone11ag0133 Cone-Chr11:598956 Cone18ag1348 Cone-Chr18:9295557 1.62E-34 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0133 - - - 0.0