Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0170 ATGAAAATGGGATTAGCAAACAACATAGGGAAATACCAGCTGAGTAGAACGATAGGGGAGGGAACTTTTGCAAAGGTAAAGCTTGCTGTGAACAGCTCCAATGGACAGTTTGTTGCGATCAAGATCATTGATAAGCAGATGGTTATGGATAGCAATCTCAAGTATCAGGTTCAGAGAGAGATTAGAACCATGAAGCTTCTTCATCATCCTAACATTGTTAGAATCCATGAGGTAATTGGTACAAAGACCAAGATCTTCATTGTAATGGAGTATGTTTCAGGAGGGCAACTGTCAGACAAGCTATCTTATGTAAAGAAACTAAGTGAGGATGAAGCAAGAAAAATGTTCCAGCAACTAATAGATGCGGTGGAATACTGCCATGACAAAGGAGTATATCACAGAGACCTCAAGCCGGAAAACTTGCTCTTGGATCAGAAGGGCAATCTCAAAGTATCCGATTTCGGACTAAGCGCGTTAAGAAAGTCTGGAGATCAACTAACTACAGCATGTGGCTCTCCAAGCTATGTAGCACCGGAGTTGCTTGTAAATAAAGGCTATGATGGAGCAGCAGCAGATATTTGGTCGTGCGGAGTAGTACTCTTCGAGTTATTGTCCGGTCACTTACCATTCGACGACCGTAATCTAATAAACTTGTACAGAAAAATAGCAAGAGCGGAATGTACGTACCCGGAATGGTTTACAGAGAGCCAGAAGAAGATCGTATCGAAAATATTTGAGCCGAACCCGAGACTGAGAATCACAATTCCAGAGATAGTAGATGATCCATGGTTTCAAATCGATTACAAGCCGACTTGCGGATATGAAGATGATGTGAAAGTTAATTTGGATGATGTTAATGCCGCTTTCGACTCTACTGAGGAGCATGATACGGAGACAAAGATGCCGAAATCGCCGAGTTTTATTAATGCTTTCCAATTGATCGCCATGTCGAATGATCTTGACTTGTCCGGTCTCTTTGAAGAAGAGCATGAGCATAAACAGAAAACAAGATTCGGGTCGAAGTACACGATCGAAAAAACGATAGAGAAAATAGAAGCAGCTGCAACTGATGCGAGTTTATCAGTAGAAAAAATGAAAAACTTCAAGATGAAAATTCACCCGAAAACGAAGATGACGAGATGTTCTAAATCATATTTGGACTTATCAGCACAGGTGATTGAGGTTGCTCCTACTAATTGTGTAATAGATGTATCGAGATCTGCAGGAGAGCTAGTGGTCTACAATGAATTCTGCAGGAGTTTAGCTACTCTGCTCACACAGAAGTCCGGTGCTGCCTCAGAGTTGCAACCGGCCGACATAGAAGTAGGCAGCAATACAAAAAGCGATCCAGAGAGGGATGAAGAAGGTACAAATAGCAAACCAGAAGAAGCAATCAACGGATACAATTCGTCTTCTTCATGA 1422 41.77 MKMGLANNIGKYQLSRTIGEGTFAKVKLAVNSSNGQFVAIKIIDKQMVMDSNLKYQVQREIRTMKLLHHPNIVRIHEVIGTKTKIFIVMEYVSGGQLSDKLSYVKKLSEDEARKMFQQLIDAVEYCHDKGVYHRDLKPENLLLDQKGNLKVSDFGLSALRKSGDQLTTACGSPSYVAPELLVNKGYDGAAADIWSCGVVLFELLSGHLPFDDRNLINLYRKIARAECTYPEWFTESQKKIVSKIFEPNPRLRITIPEIVDDPWFQIDYKPTCGYEDDVKVNLDDVNAAFDSTEEHDTETKMPKSPSFINAFQLIAMSNDLDLSGLFEEEHEHKQKTRFGSKYTIEKTIEKIEAAATDASLSVEKMKNFKMKIHPKTKMTRCSKSYLDLSAQVIEVAPTNCVIDVSRSAGELVVYNEFCRSLATLLTQKSGAASELQPADIEVGSNTKSDPERDEEGTNSKPEEAINGYNSSSS 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 839816 842691 + Conep11aG0017300.1 Cone11ag0170 447422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0170 473 MobiDBLite consensus disorder prediction 429 443 - -
Cone11ag0170 473 MobiDBLite consensus disorder prediction 429 473 - -
Cone11ag0170 473 Gene3D Phosphorylase Kinase; domain 1 2 93 - -
Cone11ag0170 473 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165(InterPro)
Cone11ag0170 473 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524(InterPro)
Cone11ag0170 473 Gene3D Transferase(Phosphotransferase) domain 1 94 285 - -
Cone11ag0170 473 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 412 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cone11ag0170 473 MobiDBLite consensus disorder prediction 445 460 - -
Cone11ag0170 473 SUPERFAMILY Protein kinase-like (PK-like) 9 265 IPR011009 -
Cone11ag0170 473 Gene3D Kinase associated domain 1, KA1 303 427 - -
Cone11ag0170 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0170 473 FunFam Non-specific serine/threonine protein kinase 5 305 - -
Cone11ag0170 473 SMART serkin_6 12 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0170 473 Pfam Protein kinase domain 12 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0170 473 FunFam Non-specific serine/threonine protein kinase 303 429 - -
Cone11ag0170 473 ProSiteProfiles Protein kinase domain profile. 12 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0170 473 FunFam Non-specific serine/threonine protein kinase 4 91 - -
Cone11ag0170 473 Pfam NAF domain 305 364 IPR004041 GO:0007165(InterPro)
Cone11ag0170 473 CDD CIPK_C 309 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0170 Cone-Chr11:839816 Cone11ag1560 Cone-Chr11:10850903 1.08E-146 dispersed
Cone11ag0170 Cone-Chr11:839816 Cone18ag1315 Cone-Chr18:9128306 8.35E-239 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81869 PF01426 BAH 3.80E-12 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0170 - - - 0.0