Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0188 | ATGGATCCTTCTTCTTCTCCTTCTTCTCAGAACTGGCTCGGTTTTTCTCTCTCTAACCAACCCCATCTCTCTCTCTTTCACGCCTTCTCCTCCTCCGCCTCCACTTCTCCAGGGGGTGGTGCACTGCAGGTGGACCCACATGTCGTAAACGAAGACAATGCAAATGCAACCGACCTGTCGATATTCACATCCAGCGGTCCAAAGCTGGAGGACTTTCTGGGTGGCTGCAATAATAATAATATTAACTTCTCTACTCATCCTCATCCTCCTCATCATCCTCATCATCACCATCACCATCACCATCAATCTCAGCCGCCACCGCCTCCGCCGCTCGGTATCTGTGATTCTCATGAACTATATGATTCCGAGCTAAAATCCATAGCCGCCACCTTTCTCCGCGGCTTCAACTCAAACAGTATTGATACTAGTATTAATACTACTCATGAGCACACTGATCATGCTCAAAACCTTGCTATGCAACCGCCATCGCATGTGTTGGTGGGTCTTCCTGATCGTCAGCCTACTCCGCCGTCCAAGAAGACTGTTGATACCTTCGGCCAACGCACCTCCATCTACCGTGGCGTTACCCGGCATAGATGGACAGGAAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGAAGAGAGGGTCAGAGCAGGAAAGGAAGACAAGGTGGTTATGATAAGGAAGAAAAAGCAGCTCGAGCTTATGATCTAGCCGCGCTTAAATACTGGGGCCCGGCCACCACCACGAACTTCTCGGTCTCAAACTATGAGAAGGAACTAGAAGATATGAAGATCATGACTAGACAGGAATTTGTTGCTTCACTTCGAAGGAAAAGTAGTGGTTTTTCTAGAGGAGCTTCCATTTACAGAGGAGTTACAAGGCACCATCAACATGGTAGATGGCAGGCAAGAATAGGAAGAGTGGCTGGCAACAAAGATCTCTACCTAGGCACATTCAGCACTCAAGAAGAGGCAGCGGAAGCTTACGACATTGCCGCTATCAAATTTCGTGGCCTGAATGCTGTAACAAACTTCGACATGAGCCGCTACGATGTCAAGAGCATAGCCAATAGCAACCTGCCAATCGGCGGGATGTCTGGGTCCCACAAGTCGGCGAGAAACTCCTCCGACTCTGATAACAAAAGCTTTGATGGAATTAGCCAACAACAACAACAACGGTCCGACCCGGACCGAGACCATTCCTCATCATCCTCCATAACCTTCACATCAAGTCAATTATTACATCATCAACCTCCCTCGTCAGCATCTGCACTAAGCTTTGCGATTCCTATCAAAGAAGACACAACAAGCAACCTTGATCATCATCAATATTGGTCCCTTCTAGGGTATAATAGTAATAACCCAAACCCGAACAATGGCAAGAACCCTAACCCTAGTTTTGGTGCTCTACCATTTACAATGGACTTTTCATCGGCTAATAATAATTCTTCCTCGTTGAATGAAAGCAATGGTGGGTTGTTAATTAATGGAGGATTTGTTCTTGATCAACATCATGATCAGCAGCAACAAATTGGTGGAAATTCAACGGCAACAACAGTGCTAGCCAACATGAATGGTCATGTTAATAATTCCCATGAAGGGACGTCAACTAGTGCTTCTTCATATGGAAATTGGATTGGAGCGTCATCAGCTCTGCATGGATTCCAAACTCATGCAAAGCCTAATCTGTATCAGACACCAATTTTCGGAATGGAATGA | 1725 | 46.26 | MDPSSSPSSQNWLGFSLSNQPHLSLFHAFSSSASTSPGGGALQVDPHVVNEDNANATDLSIFTSSGPKLEDFLGGCNNNNINFSTHPHPPHHPHHHHHHHHQSQPPPPPPLGICDSHELYDSELKSIAATFLRGFNSNSIDTSINTTHEHTDHAQNLAMQPPSHVLVGLPDRQPTPPSKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGPATTTNFSVSNYEKELEDMKIMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGMSGSHKSARNSSDSDNKSFDGISQQQQQRSDPDRDHSSSSSITFTSSQLLHHQPPSSASALSFAIPIKEDTTSNLDHHQYWSLLGYNSNNPNPNNGKNPNPSFGALPFTMDFSSANNNSSSLNESNGGLLINGGFVLDQHHDQQQQIGGNSTATTVLANMNGHVNNSHEGTSTSASSYGNWIGASSALHGFQTHAKPNLYQTPIFGME | 574 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 914968 | 917841 | + | Conep11aG0019100.1 | Cone11ag0188 | 447440 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0188 | 574 | Pfam | AP2 domain | 291 | 340 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | Pfam | AP2 domain | 192 | 246 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | SUPERFAMILY | DNA-binding domain | 190 | 256 | IPR016177 | GO:0003677(InterPro) | |
Cone11ag0188 | 574 | PRINTS | Ethylene responsive element binding protein signature | 192 | 203 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | PRINTS | Ethylene responsive element binding protein signature | 330 | 350 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | CDD | AP2 | 190 | 256 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | ProSiteProfiles | AP2/ERF domain profile. | 191 | 254 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | MobiDBLite | consensus disorder prediction | 403 | 421 | - | - | |
Cone11ag0188 | 574 | MobiDBLite | consensus disorder prediction | 83 | 112 | - | - | |
Cone11ag0188 | 574 | SMART | rav1_2 | 290 | 354 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | SMART | rav1_2 | 191 | 260 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | MobiDBLite | consensus disorder prediction | 88 | 103 | - | - | |
Cone11ag0188 | 574 | ProSiteProfiles | AP2/ERF domain profile. | 290 | 348 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | CDD | AP2 | 289 | 350 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 190 | 256 | - | - | |
Cone11ag0188 | 574 | MobiDBLite | consensus disorder prediction | 363 | 421 | - | - | |
Cone11ag0188 | 574 | MobiDBLite | consensus disorder prediction | 363 | 394 | - | - | |
Cone11ag0188 | 574 | SUPERFAMILY | DNA-binding domain | 289 | 350 | IPR016177 | GO:0003677(InterPro) | |
Cone11ag0188 | 574 | FunFam | AP2-like ethylene-responsive transcription factor | 289 | 350 | - | - | |
Cone11ag0188 | 574 | Gene3D | AP2/ERF domain | 191 | 256 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | Gene3D | AP2/ERF domain | 290 | 350 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0188 | 574 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 115 | 435 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0582 | Cone-Chr10:2729860 | Cone11ag0188 | Cone-Chr11:914968 | 4.60E-112 | dispersed | |
Cone11ag0188 | Cone-Chr11:914968 | Cone5ag1468 | Cone-Chr5:9723706 | 1.95E-114 | dispersed | |
Cone11ag0188 | Cone-Chr11:914968 | Cone18ag1297 | Cone-Chr18:9057525 | 2.08E-282 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44288 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0188 | K09285 | - | mdm:103424209 | 513.072 |