Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0223 ATGCCTCATCGAGCTCTTAATGAAGTAATGATCACGAGCACTCCACCACCGTCGACCGATCACAATCTCCCCGGTCAGATGAAGAGCTCGACGTCTCAGCTTCATTATTCGGCCTTGTTCTTCTTCCTTGGCGGATTAACAGTGCTTGCTATCTTGCTCATTCTTATATTTATTATTTGGAAAAATCTTAAACCAGCAAAGACTATGAAATTGCTAGTACAAAGTGGAATGTTGCAAGCATCTGAGTCCGATCTCATTAGTGGCAACCTTAGAACTATAACCCACTTTGACTTTAACACATTGAAGAAGGCAACAAAGGGCTTCCATCCTGCTCATCTTCTTGGACAAGGTGGATTTGGACCTGTCTATCAGGGAAAGCTAGAAGATGGTCGGTTTGTAGCGATTAAGAAACTATCCGTCGAAAAATCACAGCAAGGAGAATCGGAATTTCTTACGGAAGTGAGGTTGATCACGAGCATCCAACACAAGAACCTAGTCCGGCTTCTCGGATGCTGTGCGGAAGGGCCTCAAAGGCTACTTGTTTATGAATACATGAAGAATAGAAGCTTAGACCTCATCATTTTTGGCAAAAATAGAACTAATGATCATGATCGGGTAATTATTTTGAATTGGAAAACAAGGTTCCAAATAATCAAAGGGATCGCTCGAGGGTTGCAGTACTTGCACGAAGATTCACACATAAGAATTGTTCATAGAGACATCAAGGCTAGTAATATTCTACTTGACGATAAATTTCAGCCTAGGATTAGCGATTTCGGGCTCGCTCGGTTCTTTCCCGAAGATCAAGCTTATCTTAGCACCAATTTTGCTGGAACTTTAGGCTATACTGCACCCGAGTATGCAATTAGAGGAGAATTATCGGAAAAGGCAGACATCTATAGTTTTGGAGTTCTTATGCTTGAAATCATTAGCGGAAGAAAAAATACAGATCTATCTTTACTTTCAGAAATGCAATATCTTCCTGAATACGCATGGAAGCTATATGAGAGAAGCAGGGTGATTGAACTTGTGGATCCAAAAATGAAAGAGGAAGAGACATATGTGGAAAAGAATGTGTTGCAAGCAATCCATGTAGCCTTCTTATGTCTTCAGCCTCATGTCAATACGAGGCCTCCCATGTCGGAGATTGTTTCCATGTTAACTTGCAAAGTAGAAATGATCGGAACACCAATGCGACCGGCTTTCATAGACCGGAGGCGGACAAAGAACAACGAAGATGAAAACTATAACAAACTTCCTTGGGATTCTATTGTTGGCCCTTCTCCTTCTCCTCTACAATTTGATTCACCTTCAAGATAA 1320 41.36 MPHRALNEVMITSTPPPSTDHNLPGQMKSSTSQLHYSALFFFLGGLTVLAILLILIFIIWKNLKPAKTMKLLVQSGMLQASESDLISGNLRTITHFDFNTLKKATKGFHPAHLLGQGGFGPVYQGKLEDGRFVAIKKLSVEKSQQGESEFLTEVRLITSIQHKNLVRLLGCCAEGPQRLLVYEYMKNRSLDLIIFGKNRTNDHDRVIILNWKTRFQIIKGIARGLQYLHEDSHIRIVHRDIKASNILLDDKFQPRISDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLMLEIISGRKNTDLSLLSEMQYLPEYAWKLYERSRVIELVDPKMKEEETYVEKNVLQAIHVAFLCLQPHVNTRPPMSEIVSMLTCKVEMIGTPMRPAFIDRRRTKNNEDENYNKLPWDSIVGPSPSPLQFDSPSR 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1101542 1103225 - Conep11aG0023000.1 Cone11ag0223 447475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0223 439 Pfam Protein tyrosine and serine/threonine kinase 112 387 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0223 439 Gene3D Phosphorylase Kinase; domain 1 79 184 - -
Cone11ag0223 439 MobiDBLite consensus disorder prediction 11 26 - -
Cone11ag0223 439 ProSiteProfiles Protein kinase domain profile. 108 402 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0223 439 MobiDBLite consensus disorder prediction 1 26 - -
Cone11ag0223 439 Gene3D Transferase(Phosphotransferase) domain 1 185 395 - -
Cone11ag0223 439 SUPERFAMILY Protein kinase-like (PK-like) 89 387 IPR011009 -
Cone11ag0223 439 SMART serkin_6 108 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0223 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0223 439 FunFam Cysteine-rich receptor-like protein kinase 10 73 184 - -
Cone11ag0223 439 FunFam Cysteine-rich receptor-like protein kinase 2 185 394 - -
Cone11ag0223 439 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 46 415 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cone11ag0223 439 MobiDBLite consensus disorder prediction 414 439 - -
Cone11ag0223 439 CDD STKc_IRAK 114 388 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0223 Cone-Chr11:1101542 Cone5ag0979 Cone-Chr5:4192369 6.99E-97 dispersed
Cone11ag0223 Cone-Chr11:1101542 Cone13ag0744 Cone-Chr13:7090410 2.17E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81871 PF00643 zf-B_box 1.50E-06 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0223 - - - 0.0