Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0233 ATGTCTAAAGGGGATGAAGTTCTTGTTTTGGATTGTTGGGTGAGCCCTTTTTGCATGAGGGTCAAAATAGCTCTAAATGAAAAGGGGGTAGCTTATAAGAATCAAGAGGAGGATTTATTTGGTGGGAAGAGTGATTTGTTGCTCAAATCTAACCCAATTCACCAAAAAGTGCCTGTCCTATTGCACAATGGGAAGCCTATAAGTGAATCAACCATCATTGTCAACTACATAGATGAGGCTTGGACTACTTCACCCTCTCTCCTCCCTTCTTCCCCCTATGCTCGAGCTCAAGCCCGTTTTTGGGCCGACTTCATTGACAAAAAGCTATTTGAAGAAGCAAGAGGAATATGGACCAACCAGGGGGAAGAGCAAGAAGCTGCAAAGAAGGAGTTTATAGAGGTGGTGAAGACACTTGAGGAAGCCCTTGGGGACAAGGACTACTTTGGAGAGAACAATAGTTTTGGGTTTGTGGACATAATTGCTCTTGGGCCGGCAAGCTGGTTCTATGCTTATGAGAAGATTGGAGGGTTCAAGGTCGAGGACTATTGTCCCAAATTCTCAGCTTGGATTAAGAGATGCAAGCAAAGAGAGAGTGTTGCTAATGTAATCCCATGCCATGAAAAGGTCTATGACTTTGTTCTCTCCATGAGGAAGATGCAAGGCCTTGAATAA 672 43.9 MSKGDEVLVLDCWVSPFCMRVKIALNEKGVAYKNQEEDLFGGKSDLLLKSNPIHQKVPVLLHNGKPISESTIIVNYIDEAWTTSPSLLPSSPYARAQARFWADFIDKKLFEEARGIWTNQGEEQEAAKKEFIEVVKTLEEALGDKDYFGENNSFGFVDIIALGPASWFYAYEKIGGFKVEDYCPKFSAWIKRCKQRESVANVIPCHEKVYDFVLSMRKMQGLE 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1137342 1138157 - Conep11aG0024000.1 Cone11ag0233 447485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0233 223 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Cone11ag0233 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 212 IPR010987 -
Cone11ag0233 223 Pfam Glutathione S-transferase, C-terminal domain 123 192 - -
Cone11ag0233 223 Pfam Glutathione S-transferase, N-terminal domain 10 79 IPR004045 -
Cone11ag0233 223 Gene3D - 91 223 - -
Cone11ag0233 223 SFLD Main (cytGST) 4 219 - -
Cone11ag0233 223 CDD GST_N_Tau 7 81 - -
Cone11ag0233 223 Gene3D Glutaredoxin 3 90 - -
Cone11ag0233 223 SUPERFAMILY Thioredoxin-like 12 109 IPR036249 -
Cone11ag0233 223 SFLD Main.3: Omega- and Tau-like 4 219 IPR045073 -
Cone11ag0233 223 FunFam Glutathione S-transferase U20 91 223 - -
Cone11ag0233 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 213 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cone11ag0233 223 FunFam Tau class glutathione S-transferase 1 90 - -
Cone11ag0233 223 CDD GST_C_Tau 92 216 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cone11ag0233 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0233 Cone-Chr11:1137342 Cone15ag0988 Cone-Chr15:7921791 7.44E-91 dispersed
Cone11ag0233 Cone-Chr11:1137342 Cone14ag0993 Cone-Chr14:8223914 8.30E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0233 K00799 - gmx:100788517 316.235