Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone11ag0257 | ATGGAGACGCCGGAGGAAGGCGACGGGGGGTATGAAGTAGACATCAGCTTGAAAGATCAAATCAAATCTTCGTCTGGAAGCATATTCAATCTGATCAGGAACGAGTTAGGTCTTGAGTCAACTAGACGATTGTTTAGCCACGAAAACGTCATTAATGGCATTAAATCTGTATCCAGAGGTTTCGTCATCCATCCAGAAAACAGGTGGTACAAAGCGTGGACAAATTTCATACTGGTCTGGGCTCTGTACTCATCCTTCTTCACACCTTTGGAGTTTGGCTTCTTTAGGGGATTGCCAAAGCACCTCTTCATACTCGACATTGCAGGACAGATTGCTTTTCTACTTGACATCATCTTGCAGTTCTTTGTTGCCTACAGAGACAGTCAAACCTACCGTATGGTTTATAAGCGCACCTCTATTGCTCTCAGATACTTGAAATCCAGTTTTTTGGTTGATTTACTTGGCTGTATGCCTTGGGATATCATCTATAAGGATTCTGGAAAAAAAGAGGGATTGAGGTACCTTCTATGGATCAGATTGAGTAGGGTGCGTAAAGTGAACAATTTCTTTCATAAGCTGGAGAAAGACACACGAATCAATTACTTGTTTACTAGGATTGTAAAGCTTATTGCTGTTGAGATCTACTGTAGCCATACAGCCGCCTGTATTTTTTACTATCTGGCTACAACTCTGCCTGCATCCAAAGAGGGATACACATGGATTGGAAGTTTAAAATTGGGCGATCATGCTTACTCTAGTTTCAGAGAGATTGATATATGGAAACGCTACATAACGTCTTTATACTTTGCTGTTGTCACTATGGCCACTGTTGGGTATGGAGACATACATGCAGTCAATATAAGGGAGATGATCTTCATTATGATATATGTCTCCTTCGACATGATTATCGGTGCTTATTTGATTGGTAACATGACGGCATTGATTGTAAAAGGATCAAATACAGAAAAATTCAGGGACAAAATGACAGACCTCATCAAATATATGAACAGAAATCGACTTGGAAGTGACATCCGTAATCAGGTCAAAGGCCATGTACGTTTGCAGTATGAAAGTAGCTACACTGATCCTGCTGCTCTTCAAGACATTCCCATTTCTATTCGTGCCAAGATTTCAAGGACTTTGTACTTACCCTGTGTTGAGAACGCTGCGCTGTTTAAGGGATGCTCCTCTGAATTCATCAATCAGATAGTGAGTAAAGTCCATGAAGAGTTTTTTCTTCCTGGAGAAGTAATTATGGAGCAGGGAATTGTAGTGGATCAACTTTATTTTGTCTGTCATGGTGTCCTGGAGGAAGTGGGAATCGGAGAGGATGGACTAGAAGAGACTGTTTCGCTATTAGAACCCGAAAGCTCGTTTGGAGAGGTTTCTATACTTTGCAACATTCCTCAGCCTTATACAGTTCGAGTTTGTGAATTATGTCGGCTTCTACGGCTCGATAAACAGTCTTTCACATACATTCTCGAGATATTCTTCTCTGATGGTCGTAAAATTTTGAATAACCTTCTGGAGGGAAAAGAATCCGACGTTCGAATAAAGCAACTGGAATCAGATATCACATTTCATATCTCCAAGAAAGAAGCTGAACTTTCTTTGAAGCTAAATAGTGCAGCTTATGATGGAGACTTAAAACAGCTGAAAAATATAATCCGAGCCGGAGCTGATCCAAACAAGACAGACTATGATGGAAGGTCACCATTGCATCTTGCGGCATCAAGAGGAAATGAGGATATTACTTTTTTCCTCATCCAGGAAGGAGTAGACATCGATGTTAAAGATAATTTTGGAACAACGCCATTACTAGAAGCCATAAAAAACGGGCACGATCGAGTTGCCTCTTTGCTTGTAAACCAAGGCGCCACTTTGAAGATAGAAAATCCAGGTAGCTTTCTATGTACGGCAGTTGCAAAGGGCGATTCCGATTTCGTTAGAAAACTATTGTTAAATGGGATCGATCCAAACTCCAAAGATTACGATCACCGAACCCCGCTTCACATAGCCACGTCCGAAGGATTCTACATGATGGCTAAACTGCTATTAGAAGCTGGAGCCAGTGTTTTCTCAAAGGACAGAAGAGGAAACACCCCTCTTGATGAAACTCGAATGTCTGGAAACAAGAATCTGAGGAAGCTTGTAGAGAAGTGGAAGGTTTTTCAGTTATCAGAATTCCCCCACTGTCCCCAAGAAATACCTGATAGAAAACACTCAAGGAAATGCACAGTGTTTCCTTTCCACCCATGGGAAGCCAAAGAAGTAGAAGGTAGAAGAAGAACTGGGATTGTGATGTGGGTCCCACGTACAATTCAAGAGCTTATCAGACTTGCATCTGAGCAGCTTGAAACTTTAATGAGTGGTTCCTCTTGTGTATTATCAGAAGATGGAGGTAAAATTTGTGATGTAGAGTTGATCAGTGATGGCCAGAAACTGTATCTAAGTCAATCAAACACTGTAAATGAATGA | 2478 | 41.16 | METPEEGDGGYEVDISLKDQIKSSSGSIFNLIRNELGLESTRRLFSHENVINGIKSVSRGFVIHPENRWYKAWTNFILVWALYSSFFTPLEFGFFRGLPKHLFILDIAGQIAFLLDIILQFFVAYRDSQTYRMVYKRTSIALRYLKSSFLVDLLGCMPWDIIYKDSGKKEGLRYLLWIRLSRVRKVNNFFHKLEKDTRINYLFTRIVKLIAVEIYCSHTAACIFYYLATTLPASKEGYTWIGSLKLGDHAYSSFREIDIWKRYITSLYFAVVTMATVGYGDIHAVNIREMIFIMIYVSFDMIIGAYLIGNMTALIVKGSNTEKFRDKMTDLIKYMNRNRLGSDIRNQVKGHVRLQYESSYTDPAALQDIPISIRAKISRTLYLPCVENAALFKGCSSEFINQIVSKVHEEFFLPGEVIMEQGIVVDQLYFVCHGVLEEVGIGEDGLEETVSLLEPESSFGEVSILCNIPQPYTVRVCELCRLLRLDKQSFTYILEIFFSDGRKILNNLLEGKESDVRIKQLESDITFHISKKEAELSLKLNSAAYDGDLKQLKNIIRAGADPNKTDYDGRSPLHLAASRGNEDITFFLIQEGVDIDVKDNFGTTPLLEAIKNGHDRVASLLVNQGATLKIENPGSFLCTAVAKGDSDFVRKLLLNGIDPNSKDYDHRTPLHIATSEGFYMMAKLLLEAGASVFSKDRRGNTPLDETRMSGNKNLRKLVEKWKVFQLSEFPHCPQEIPDRKHSRKCTVFPFHPWEAKEVEGRRRTGIVMWVPRTIQELIRLASEQLETLMSGSSCVLSEDGGKICDVELISDGQKLYLSQSNTVNE | 825 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 1243119 | 1249686 | - | Conep11aG0026400.1 | Cone11ag0257 | 447509 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone11ag0257 | 825 | Gene3D | - | 514 | 633 | IPR036770 | - | |
| Cone11ag0257 | 825 | Gene3D | - | 72 | 317 | - | - | |
| Cone11ag0257 | 825 | PRINTS | EAG/ELK/ERG potassium channel family signature | 106 | 116 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone11ag0257 | 825 | PRINTS | EAG/ELK/ERG potassium channel family signature | 215 | 225 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone11ag0257 | 825 | PRINTS | EAG/ELK/ERG potassium channel family signature | 263 | 280 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone11ag0257 | 825 | PRINTS | EAG/ELK/ERG potassium channel family signature | 307 | 316 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone11ag0257 | 825 | SUPERFAMILY | cAMP-binding domain-like | 319 | 509 | IPR018490 | - | |
| Cone11ag0257 | 825 | ProSiteProfiles | Ankyrin repeat region circular profile. | 665 | 697 | - | - | |
| Cone11ag0257 | 825 | ProSiteProfiles | Ankyrin repeat profile. | 568 | 600 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | ProSiteProfiles | Ankyrin repeat profile. | 601 | 633 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | Pfam | KHA, dimerisation domain of potassium ion channel | 743 | 817 | IPR021789 | - | |
| Cone11ag0257 | 825 | SUPERFAMILY | Voltage-gated potassium channels | 65 | 316 | - | - | |
| Cone11ag0257 | 825 | ProSiteProfiles | KHA domain profile. | 744 | 825 | IPR021789 | - | |
| Cone11ag0257 | 825 | Pfam | Ion transport protein | 70 | 317 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone11ag0257 | 825 | FunFam | Potassium channel KAT2 | 379 | 515 | - | - | |
| Cone11ag0257 | 825 | SMART | cnmp_10 | 391 | 509 | IPR000595 | - | |
| Cone11ag0257 | 825 | SUPERFAMILY | Ankyrin repeat | 525 | 717 | IPR036770 | - | |
| Cone11ag0257 | 825 | CDD | CAP_ED | 391 | 505 | IPR000595 | - | |
| Cone11ag0257 | 825 | ProSiteProfiles | Ankyrin repeat region circular profile. | 601 | 632 | - | - | |
| Cone11ag0257 | 825 | ProSiteProfiles | Ankyrin repeat profile. | 665 | 697 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | PANTHER | POTASSIUM CHANNEL AKT1 | 47 | 817 | IPR045319 | GO:0005249(InterPro)|GO:0006813(InterPro) | |
| Cone11ag0257 | 825 | SMART | ANK_2a | 568 | 597 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | SMART | ANK_2a | 665 | 694 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | SMART | ANK_2a | 535 | 564 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | SMART | ANK_2a | 632 | 661 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | SMART | ANK_2a | 601 | 630 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | FunFam | Potassium channel SKOR | 71 | 316 | - | - | |
| Cone11ag0257 | 825 | Gene3D | Jelly Rolls | 359 | 513 | IPR014710 | - | |
| Cone11ag0257 | 825 | Pfam | Cyclic nucleotide-binding domain | 411 | 495 | IPR000595 | - | |
| Cone11ag0257 | 825 | Gene3D | - | 634 | 725 | IPR036770 | - | |
| Cone11ag0257 | 825 | Pfam | Ankyrin repeats (3 copies) | 541 | 630 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | Pfam | Ankyrin repeats (3 copies) | 637 | 715 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | PRINTS | Ankyrin repeat signature | 569 | 584 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | PRINTS | Ankyrin repeat signature | 681 | 695 | IPR002110 | GO:0005515(InterPro) | |
| Cone11ag0257 | 825 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 391 | 511 | IPR000595 | - | |
| Cone11ag0257 | 825 | ProSiteProfiles | Ankyrin repeat region circular profile. | 568 | 600 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag0257 | Cone-Chr11:1243119 | Cone7ag0655 | Cone-Chr7:3406157 | 1.14E-97 | dispersed | |
| Cone11ag0257 | Cone-Chr11:1243119 | Cone18ag1228 | Cone-Chr18:8724053 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone11ag0257 | K21867 | - | gmx:100797927 | 1252.65 |