Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0271 ATGATGATGAAGCTATATCATGAACTACTTCTAAGACGACAAGTAGAGATGCTCTGTCTTCTCGTCGTTTTACCTCTAGCCTTCTCGGATCTCGCATCCGACAGAGCAACTCTTGTCGCTTTTCGGGCATCCGTAGGTGGTCGCCCCCTCCTCCTATGGAACTTCTCCGACGCCACTCCGTGCTCATGGGTCGGCGTCAACTGCACCCAAACAGGCGTATACGAGCTCCGCCTTCCGGCCATGGGTCTTGCCGGCCACCTTCCGCTCGGACTCGGCAACCTGACTGAGCTCCAAACTCTCTCTCTCCGATTCAACTCTCTCTCCGGCCAACTCCCCGCCGATTTCTCCAACCTCCACAATCTACGCAACCTCTACTTACACGGAAACTCCTTCTCAGGCGAAATCCCGGCTTTTCTCTCCACCCTACAGAACTTAGTCCGGTTGAATTTAGCCAACAACAACTTCTCCGGCGAGATCCCTATAGGGTTTAACAACCTCACAAGGCTAGCTACTCTCTACTTAGAAAGCAACCACCTTTCCGGCCCAATCCCTCTTCTAAACATTTCCACTTTAGTCCAATTCAATATCTCTTACAATCAGCTAAATGGGTCCGTCCCATTAAAGCTCTCTTTTTTTCCTGATACCGCTTTCGCTGGAAATTCCCTTTGCGGCCAGCCATTATCCCCCTGCATTAAACCCAAGAAGAAATTCTCCAGCGGAGCAATCGCTGGAATCGTGATCGGCGTTTTCTTCGGGTTCATAATCTTACTCATCATTCTATTCTTGTTGTGTAAGAAATCCAAGGGTAGTAGAGAAAATCAGAAATCAAGGTCGAAAGAGATGTCTCCGGCATTAACCGAATCGGCTAAGGACGGTCCGAGAGAAAAGTCAGTGGGGCCTGGTGTGGGGAGTAGTGATAGTATGAGTGTAGAGTACTCTGGTTTGGTTAAAGGGAAGCTCAAGAGTGGAATAGTGAATAAGAGCTTGGTTTTTGTAGGGAATACTCCTAAGGTGTTTGATTTGGACGATTTGTTAAGAGCATCAGCAGAGGTGCTAGGGAAAGGGACGTTTGGGACAGCATATAAGGCGACACTCGAGGTGGGGGTGGCAATGGCTATTAAGAGGCTTAAGGATGTGGTTGTTTCAGAGAAGGAGTTTAGGGACAAGATTGAAGAAGTGGGGAGGATGAATCATGAGAGCTTGGTCCCTCTTAGAGCTTACTACTACAATACTGATGAGAAGCTTCTGGTTTTTGATTACATGCCCATGGGAAGCCTATCAGCACTTTTACATGGGCGGGAAGCAGGAAGGACTCCATTGAATTGGGAAGCAAGGTCCGGAATAGCCCTAAGAGCGGCTCGTGGGATCAGCTACTTACATTCTCACATGATGTCCCATGGAAACATCAAATCATCCAACATCCTCCTCGACAAATCATACCAAGCTTGTGTCTCGGACTTCGGGCTTTCCAAACTGGCAAGCCCCACAGTAACTCCGAATCGAATTGCGGGCTATCGAGCCCCAGAAGTAACAGACCCGCACAAGGTAACCGAAAAGTCGGATATCTATAGCTTTGGAGTGCTCCTTTTGGAGCTTCTAACCGGACGTGCCCCAACTTACTCGATATTGAACGAAGAAGGGGTTGACCTTCCGAGATGGGTCCAGTCCATGGTCCAAGAGGAGTGGACTTCTGAAGTGTTTGACATCGAGCTTCTTAGATACCAAAACGTAGAGGAAGAGATGGTGCAACTTTTACAGCTCGCTTTGCAATGTACGGCCCCTTATCAAGATAATCGGCCTTTGATGGATGAGGTGGTAAGAAGAATAGAGGAAATTTGTCGATCGAGCTTAGAGAAAGAGCAGGAGATCATGAATAGTAGTAGTACTATTGATAATAACGGTGTTTCTCCGATGTTTTATTCGGCCGATTCGAATGTTGTTTTACCTAGTTAG 1953 47.72 MMMKLYHELLLRRQVEMLCLLVVLPLAFSDLASDRATLVAFRASVGGRPLLLWNFSDATPCSWVGVNCTQTGVYELRLPAMGLAGHLPLGLGNLTELQTLSLRFNSLSGQLPADFSNLHNLRNLYLHGNSFSGEIPAFLSTLQNLVRLNLANNNFSGEIPIGFNNLTRLATLYLESNHLSGPIPLLNISTLVQFNISYNQLNGSVPLKLSFFPDTAFAGNSLCGQPLSPCIKPKKKFSSGAIAGIVIGVFFGFIILLIILFLLCKKSKGSRENQKSRSKEMSPALTESAKDGPREKSVGPGVGSSDSMSVEYSGLVKGKLKSGIVNKSLVFVGNTPKVFDLDDLLRASAEVLGKGTFGTAYKATLEVGVAMAIKRLKDVVVSEKEFRDKIEEVGRMNHESLVPLRAYYYNTDEKLLVFDYMPMGSLSALLHGREAGRTPLNWEARSGIALRAARGISYLHSHMMSHGNIKSSNILLDKSYQACVSDFGLSKLASPTVTPNRIAGYRAPEVTDPHKVTEKSDIYSFGVLLLELLTGRAPTYSILNEEGVDLPRWVQSMVQEEWTSEVFDIELLRYQNVEEEMVQLLQLALQCTAPYQDNRPLMDEVVRRIEEICRSSLEKEQEIMNSSSTIDNNGVSPMFYSADSNVVLPS 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1312509 1315389 - Conep11aG0027800.1 Cone11ag0271 447523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0271 650 PANTHER OS05G0588300 PROTEIN 19 618 IPR050994 -
Cone11ag0271 650 Gene3D Ribonuclease Inhibitor 33 144 IPR032675 -
Cone11ag0271 650 Pfam Protein kinase domain 350 606 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0271 650 FunFam pollen receptor-like kinase 1 317 420 - -
Cone11ag0271 650 FunFam Probable inactive receptor kinase RLK902 31 187 - -
Cone11ag0271 650 SUPERFAMILY L domain-like 53 209 - -
Cone11ag0271 650 ProSiteProfiles Protein kinase domain profile. 346 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0271 650 SUPERFAMILY Protein kinase-like (PK-like) 350 618 IPR011009 -
Cone11ag0271 650 Gene3D Ribonuclease Inhibitor 148 230 IPR032675 -
Cone11ag0271 650 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Cone11ag0271 650 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 421 623 - -
Cone11ag0271 650 Pfam Leucine Rich Repeat 97 118 IPR001611 GO:0005515(InterPro)
Cone11ag0271 650 Pfam Leucine Rich Repeat 120 142 IPR001611 GO:0005515(InterPro)
Cone11ag0271 650 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515(InterPro)
Cone11ag0271 650 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524(InterPro)
Cone11ag0271 650 MobiDBLite consensus disorder prediction 272 307 - -
Cone11ag0271 650 Gene3D Phosphorylase Kinase; domain 1 320 420 - -
Cone11ag0271 650 Gene3D Transferase(Phosphotransferase) domain 1 421 635 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0271 Cone-Chr11:1312509 Cone16ag0255 Cone-Chr16:2817920 2.73E-195 dispersed
Cone7ag0778 Cone-Chr7:4973041 Cone11ag0271 Cone-Chr11:1312509 5.97E-39 dispersed
Cone11ag0271 Cone-Chr11:1312509 Cone18ag1215 Cone-Chr18:8658053 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81872 PF00149 Metallophos 3.40E-15 CL0163 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0271 - - - 0.0