Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0276 ATGGCATCAGCACAACCCACGAAGCTGAGATGGGGCGAGCTGGACGAGGATGATGGAGAGGATTTTGATTTTCTCCTGCCGCCGAAGCAGGTAATCGGACCCGACCAGAATGGGATCAAGAAGGTAATCGAATACAAATTCAACGATGATGGCAATAAGGTCAAGGTCACTACGATTTCTCGCACTCGCAAGCTTGCAAACGCTCGCCTGAGCAAGAGCGCTTTGGAGCGCCGATCTTGGCCCAAGTTTGGGGATGCTGTGCACGAAGATGTCGGTAGCAGGCTAACCATGATTTCCACTGAAGAAATCCTCCTCGAGCGCCCTAGGGCTCCTGGTAGCAAAGCGGAAGAGCCAAAGGCAGCAGGGGACCCACTGGCCCAAATGGGGAAGGGAGGTGCTGTTCTCATGGTCTGTAGGACTTGTGGTAAAAAGGGAGATCACTGGACCTCAAGATGTCCTTACAAGGATCTGGCCCAACCTTCTGAGGGACTCGAGAAGCTGCCTGCTTCAGAGACTACTGCTGCAGCACCTGGTGGCCCAGCCAAATCAACATATGTTCCCCCGGGCATGAGAGCCGGAGCAGATAGGAGTGCTGGATCCGATATGAGACGTAGAAATGACGAGAACTCTGTTAGAGTGACTAACCTCTCAGAGGACACGAGGGAGCCGGACCTGCTCGAGCTTTTCAGACCGTTTGGTGCAGTGAGCCGTGTGTATGTTGCTGTTGACCAGAAGACAGGTATGAGCAGAGGGTTCGGGTTTGTCAACTTTGTGAACAGAGAAGACGCCCAAAGAGCCATCAACAAGCTTAATGGCTATGGTTACGACAATCTCATCCTTAGAGTTGAGTGGGCCACCCCTAGGGCAACTTAA 873 52.81 MASAQPTKLRWGELDEDDGEDFDFLLPPKQVIGPDQNGIKKVIEYKFNDDGNKVKVTTISRTRKLANARLSKSALERRSWPKFGDAVHEDVGSRLTMISTEEILLERPRAPGSKAEEPKAAGDPLAQMGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAQPSEGLEKLPASETTAAAPGGPAKSTYVPPGMRAGADRSAGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1337952 1339799 + Conep11aG0028300.1 Cone11ag0276 447528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0276 290 Pfam Eukaryotic translation initiation factor 3 subunit G 30 157 IPR024675 -
Cone11ag0276 290 CDD RRM_eIF3G_like 210 285 IPR034240 -
Cone11ag0276 290 Pfam RNA recognition motif 211 277 IPR000504 GO:0003723(InterPro)
Cone11ag0276 290 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 8 289 IPR017334 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Cone11ag0276 290 CDD eIF3G 37 156 IPR024675 -
Cone11ag0276 290 MobiDBLite consensus disorder prediction 169 210 - -
Cone11ag0276 290 PIRSF Transl_init_eIF-3_RNA-bind 1 290 IPR017334 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Cone11ag0276 290 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 23 285 - -
Cone11ag0276 290 SUPERFAMILY RNA-binding domain, RBD 194 288 IPR035979 GO:0003676(InterPro)
Cone11ag0276 290 FunFam Eukaryotic translation initiation factor 3 subunit G 172 290 - -
Cone11ag0276 290 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 209 287 IPR000504 GO:0003723(InterPro)
Cone11ag0276 290 SMART rrm1_1 210 283 IPR000504 GO:0003723(InterPro)
Cone11ag0276 290 Gene3D - 170 290 IPR012677 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0276 Cone-Chr11:1337952 Cone4ag0705 Cone-Chr4:3690151 6.38E-139 dispersed
Cone11ag0276 Cone-Chr11:1337952 Cone18ag1212 Cone-Chr18:8630108 3.58E-202 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0276 K03248 - csv:101212619 501.901