Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0317 ATGCGGATGAGTTGTAATGGCTGCCGCGTCCTGCGCAAAGGCTGCAGTGAAAACTGTAGCATAAGACCCTGTTTGCAGTGGATCAAAAGCCCTGAATCCCAAGCAAACGCTACCGTTTTCCTCGCTAAGTTCTTCGGCCGAGCCGGGCTCATCAACCTCATCAACTCCGGCCCGAAACATCTCCGACCCGCCATTTTTAGATCCTTGCTGTACGAGGCTTGCGGCCGGATACTGAACCCGATTTTCGGATCAGTTGGGTTGTTGTGGTCCGGAAGCTGGCAGCTCTGCCAAGAGGCGGTCGAGGCGGTGCTTAAGGGAGATCAGATCACGCCGATCACCGCTGAAGCGGCGGCGACGGATCACGGTGCGTTGCTAAAAGGGTATGATATTCGTCACGTGTATAATAAGGACGAGAACTCGACTGAGACGAGCGATTCTCATACGCGAGTCATCAAGACACGGCGCCGGGTCAAGAAGGATAAGAAGGCGGCTGCCGTCATCGAAGACTCGGGCCGTGGGTTCTGCGCCGATGAGCTGAGCCAACAGTCCGACGCGCCAAATGTTGAGAACGAGAGTAAGGAATCGGGCGAGAGCATGATTTCGACGGAGACGACCACTTCTCGTTCGTTTCGGTCGGAGCCGGTTCCGAAGCCGAGCGGAGAGCTACATGTTGGCTTAGCACTTGAGCTGACGTTGGGGTTGGAGCCCGTATCACGTGACCATCACATGGTTCCCATGAAGAAGAGAAGGATTGAGACCTCCACGTGTGATGAGAGTGGCTCGTGTAAGATGGAACTGGGCTTGGATTTACGGGCTTGA 819 55.31 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFFGRAGLINLINSGPKHLRPAIFRSLLYEACGRILNPIFGSVGLLWSGSWQLCQEAVEAVLKGDQITPITAEAAATDHGALLKGYDIRHVYNKDENSTETSDSHTRVIKTRRRVKKDKKAAAVIEDSGRGFCADELSQQSDAPNVENESKESGESMISTETTTSRSFRSEPVPKPSGELHVGLALELTLGLEPVSRDHHMVPMKKRRIETSTCDESGSCKMELGLDLRA 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1550023 1551173 + Conep11aG0032500.1 Cone11ag0317 447569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0317 272 PIRSF AS2 1 182 IPR017414 -
Cone11ag0317 272 PIRSF AS2 168 271 IPR017414 -
Cone11ag0317 272 MobiDBLite consensus disorder prediction 177 213 - -
Cone11ag0317 272 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Cone11ag0317 272 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 235 - GO:0010468(PANTHER)
Cone11ag0317 272 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Cone11ag0317 272 MobiDBLite consensus disorder prediction 177 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0317 Cone-Chr11:1550023 Cone19ag0280 Cone-Chr19:2004222 1.01E-72 dispersed
Cone11ag0317 Cone-Chr11:1550023 Cone13ag0829 Cone-Chr13:7525201 3.50E-52 wgd
Cone11ag0317 Cone-Chr11:1550023 Cone19ag0834 Cone-Chr19:6592100 4.39E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44299 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0317 - - - 0.0