Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0355 ATGATAATCAATATGAGAATCTTCATCTCAATTGTCTTATTTCTCGTCATCTTCTCTAATCATGCAGCTGCATATGATCCGTTGGATCCGACCGGGAACATAACGATCAAGTGGGATATTATGTCGTGGACACCAGACGGTTACGTGGCAGTGGTGACTATGAACAATTTTCAAATGTACCGGCACATAATGAGCCCAGGTTGGACCTTAGGGTGGACATGGGCCAAGAAAGAAGTGATATGGTCCATGGTAGGGGCTCAAACCACAGAACAAGGTGATTGTTCCAAATTTAAAGGGAACATACCTCATTGTTGTAAGAAAAACCCTACAGTTGTGGACTTGCTACCTGGTGTTCCTTACAACCAACAGTTTACAAATTGTTGCAAAGGTGGTGTTGTGGCAGCTTGGGGCCAGGACCCACAAGCTTCTGTTTCTGCCTTTCAAATCAGTGTTGGCCAAGCTGGCACCTCGAACAAGACAGTTAAGCTTCCTAAGAATTTCACTTTGCTCGGGCCGGGACCGGGATATACTTGTGGGCCGGCTAAAGTTGTGCCTTCCACCGCTTTTCTCACTCCGGATCGCCGACGCAAAACTCAGGCGCTAATGACATGGAATGTGACATGCACATACTCACAGTTCCTGGCCAGAAAGAACCCAGGTTGTTGTGTCTCCTTCTCATCTTTCTACAATGACACAATCACTCCTTGCCCTTCCTGTGCTTGTGGATGCCAAACCAAAGACACTTGTGTCAAGAGTGATTCTCACGTTCTGAAAATGGTGGGAGTAAACACTCCAAGAAAAGACAACGCCCCATTGCTACAATGCACACATCACATGTGTCCTGTTAGGGTTCATTGGCATGTGAAGGTGAACTACAAGGACTATTGGCGTGTTAAGGTCTCCATCACAAACTTCAATTACCGCATGAACTACACATTGTGGAGTCTTGTCGTTCAGCATCCAAATCTCAACAATGTCACTCAAGTTTTCAGCTTTGATTACAAGCCCCTTGTCCCCTACCAATCCATCAATGATACCGGGATGTTTTACGGCATGAAATACTACAATGACTTGCTTATGGAAGCTGGGCCATTTGGAAATGTTCAATCAGAAGTTCTACTTCAAAAGGACAAGAACACTTTCACATTCAAGCAAGGGTGGGCTTTTCCGAGAAAGGTTTACTTCAATGGTGATGAATGCATGCTGCCGCCACCCAATGCTTACCCCTTTCTACCAAATTCTGCTCATAATGCACATCTCTTTGCTTTCTCTACTACTACTCTATTTGCTTCAATATTGCTTGTTTTCTTATTAGGGCTTTTCTGA 1326 44.57 MIINMRIFISIVLFLVIFSNHAAAYDPLDPTGNITIKWDIMSWTPDGYVAVVTMNNFQMYRHIMSPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKNPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPQASVSAFQISVGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTAFLTPDRRRKTQALMTWNVTCTYSQFLARKNPGCCVSFSSFYNDTITPCPSCACGCQTKDTCVKSDSHVLKMVGVNTPRKDNAPLLQCTHHMCPVRVHWHVKVNYKDYWRVKVSITNFNYRMNYTLWSLVVQHPNLNNVTQVFSFDYKPLVPYQSINDTGMFYGMKYYNDLLMEAGPFGNVQSEVLLQKDKNTFTFKQGWAFPRKVYFNGDECMLPPPNAYPFLPNSAHNAHLFAFSTTTLFASILLVFLLGLF 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1740982 1743215 + Conep11aG0036500.1 Cone11ag0355 447607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0355 441 PIRSF COBRA 1 440 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cone11ag0355 441 PANTHER PROTEIN COBRA 7 432 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cone11ag0355 441 Pfam COBRA-like protein 48 211 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0355 Cone-Chr11:1740982 Cone13ag0028 Cone-Chr13:177797 7.70E-279 dispersed
Cone3ag0918 Cone-Chr3:4716767 Cone11ag0355 Cone-Chr11:1740982 3.29E-160 transposed
Cone11ag0355 Cone-Chr11:1740982 Cone18ag1145 Cone-Chr18:8250218 3.57E-218 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0355 - - - 0.0